Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0085 ATGGAGCAAGATTACTGTGGATTCTTCCATATGATACATCAACCAACTTTTCCTTATATAGGGCCGGAGGGAGTAGATATAATTGAAGAATGTGGTTTGATCACATCCTATCCTAGTGTCAGTGGCCATGTTGTCAAACCACATCAGTCAATATCTCTATTAATGCTCAAGTTAGCAGATGGACTTGCCACAAAAGAAGCAAAGAGTAATGTTAATAACTTGCACTCTAACCCAGGGCCTGCATTCTCTGCTGTACTGAGTTCATACGGTGCAGTGAAATGTGATATTTTTGTGGGAGATTGGGTACAGGACCTATCTGGTCCAATGTACACAAATGAGAGCTGCCATCTGATTCAAGATCCTCAAAACTGTATCAGAAATGGACGTCCTGATTTGGGGTACCTTTACTGGAGATGGAAACCAAAGGGCTGTGAATTACCAAAGTTCAATCCAAAGGAATTCCTTCACATTATGAGGAATAAATCATGGGCCTTTATCGGCGATTCAATCTCTCGCAACCATGTGCAATCTTTACTTTGTATTCTCTCAAAGGTTGAAGAAGCTAATGAGGTTTACCATGATGAGGAATATAGATCAAAAATATGGAAATTCCCTTCTCACAACTTCACACTCTCAGTAATATGGTCACCTTTACTTCTCAAAGCAGATATATTTGAAGACAATAATGGAGTTTCCTCCAAAGAAATAGACCTTTATCTTGATATTCTAGACACCAAATGGACTAATCAATTTAACAATTTTGATTATGTTATAATGGCTGGTGGAAAATGGTTTCTCAAGACTGCAATATACCATGAAAACGGCATGATAACCGGCTGCCATTACTGTCCTGGAAGGAATTTAACAGAACTAGGATTCGACTATGCATACCGCAAAGTGCTGCAGATGGTGTTTGATTTTTTGACGAACACAAATAACAACACTACTGTTTTATTCAGAACAACCACACCAGATCACTTTGAAAATGAGCAGTGGTTTAATGGAGGGTATTGCAATAGGACAGTGCCTTTCAAAGAGGGTCAAATTGATATCAGTAATGTAGATTCTATTATGAGAGGTATTGAACTTGAAGTGTTTAACAAGACTGCTGCGACGTCGCCAGGTGAAAACTTGAAACTTTTTGACACAACTTGGCTCTCATTGTTGAGACCTGATGGGCATCCGGGACCGTACCGCTTTTTTCATCCATCTGGAAATGGTAAAGTACAGAATGATTGTTTGCATTGGTGTTTGCCAGGACCAATTGATTCATGGAATGATTTATTGATGCAAATGCTGTGA 1302 0.3917 MEQDYCGFFHMIHQPTFPYIGPEGVDIIEECGLITSYPSVSGHVVKPHQSISLLMLKLADGLATKEAKSNVNNLHSNPGPAFSAVLSSYGAVKCDIFVGDWVQDLSGPMYTNESCHLIQDPQNCIRNGRPDLGYLYWRWKPKGCELPKFNPKEFLHIMRNKSWAFIGDSISRNHVQSLLCILSKVEEANEVYHDEEYRSKIWKFPSHNFTLSVIWSPLLLKADIFEDNNGVSSKEIDLYLDILDTKWTNQFNNFDYVIMAGGKWFLKTAIYHENGMITGCHYCPGRNLTELGFDYAYRKVLQMVFDFLTNTNNNTTVLFRTTTPDHFENEQWFNGGYCNRTVPFKEGQIDISNVDSIMRGIELEVFNKTAATSPGENLKLFDTTWLSLLRPDGHPGPYRFFHPSGNGKVQNDCLHWCLPGPIDSWNDLLMQML* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0085 433 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
Tpr6g0085 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 73 433 IPR029962 GO:0016413
Tpr6g0085 433 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 432 IPR026057 GO:0016740
Tpr6g0085 433 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 73 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0085 Tpr-Chr6 708371 712751 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0085 - - gmx:100795653 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0085 6 708371 712751 Tpr5g1424 5 27224817 27228558 PCT