Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1424 ATGTTCTTAACAACTAATAGTTTCCATATCCTTCCCTATACCAATTACTACTACTTCATAACACCGTTTTATTTGTCATGTAAAAAAGTACCTAAGTCCCAAACTTGTTTCATTTTCCATCTTTGGTCCTTCAACATGGTGAAGAACAGAGCTGAAAATTTTAGCTCATTGTTTTCACTTCAAAATCACAATCTTTTCTGTGTAAAATTTGCAGCATCAATTTTCTTAGTGGGTCTTGCTTTTCGTATTGTTTTTTGGGATTCATTCAGTTTTTCATCATTTGTAGAGATAGAAAAAGCTTCTTCTTCTCCTCCTCCACCTCAAACAGAACCAAAAACAGAGTCCTCTGTTTTCTCTTCTCCAATTGAAGCACCAAAATTTGATGAATTTCAAGTGAACAACAAGACTCAAACTTTTTTGAATGTTGCAGAAAAATGTGATTTGTTTGTGGGAGATTGGGTGTCTGATCTATCTTATCCAATGTACACAAATGAGAGTTGTCATGTGATTGAACCTCATCAAAATTGCATGAAAAATGGACGGCCAGATTTAGGGTACCTTTATTGGAGGTGGACCCCAAAAGAGTGTGAATTACCAAAGTTCAACCCAAAGAAGTTTCTTAATCTCATGAGAAATAAAGCAATGTCCTTTATTGGTGATTCTATCTCACGCAACCATGTTCAATCCCTACTTTGCATTCTCTCACAGGTGGAACCAGCTGTTGAGATCTACCATGACAAGGAATATAGATCAAAGATATGGAAATTTCCTTCTCATAACTTCACACTCTCAGTAATATGGACACCTTTCCTTATCAAAGCAGCTATTTATGAAGACATGAATGGAGTTTCATCTTCAATGGTACAACTTCATCTTGATACTCTTGACCAACTATGGACCAAACAATTCAACACTTTTGATTATGTTGTAATTGGTGGTGGAAAATGGTTTCTAAAGTCTTCAATATATCATGAAAACAACAAAGTATCTGGCTGCCATTACTGTCCTGGAAAGAATTTAACCGATCTAGGGTTCGACTACGCGTACCGCAAAGCTTTACAACTTGTTTTCAACTTCTTTACAAGTTCTAGCCATAATGCAACTGTTTTATTTAGAACTACAACACCAGATCATTTTGAAAATGGTGAATGGTTTAGTGGAGGGTATTGTAATAGAACTATACCCTTCAAAGAGGGTGAAATTGATATGATAGATGTAGATTCTATCATGAGAGGTATTGAAGTTGATGAGTTTGAGAAAGCTATTACATCACTAGGATCTGAGAAAAGGGTAAAGTTGAAACTTTTGGACACAACTTTTCTTTCATTGTTGAGACCAGATGGACATCCAGGACCTTATAGACAGTTTCAGCCATTTGCAAAAGATAAGAATGCTAAAGTTCAGAATGATTGCTTGCATTGGTGTTTACCAGGACCAATTGATTCATGGAATGATATAGTAATGGAAATGTTAGTCAATGGTTAA 1485 0.3556 MFLTTNSFHILPYTNYYYFITPFYLSCKKVPKSQTCFIFHLWSFNMVKNRAENFSSLFSLQNHNLFCVKFAASIFLVGLAFRIVFWDSFSFSSFVEIEKASSSPPPPQTEPKTESSVFSSPIEAPKFDEFQVNNKTQTFLNVAEKCDLFVGDWVSDLSYPMYTNESCHVIEPHQNCMKNGRPDLGYLYWRWTPKECELPKFNPKKFLNLMRNKAMSFIGDSISRNHVQSLLCILSQVEPAVEIYHDKEYRSKIWKFPSHNFTLSVIWTPFLIKAAIYEDMNGVSSSMVQLHLDTLDQLWTKQFNTFDYVVIGGGKWFLKSSIYHENNKVSGCHYCPGKNLTDLGFDYAYRKALQLVFNFFTSSSHNATVLFRTTTPDHFENGEWFSGGYCNRTIPFKEGEIDMIDVDSIMRGIEVDEFEKAITSLGSEKRVKLKLLDTTFLSLLRPDGHPGPYRQFQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIVMEMLVNG* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1424 494 Pfam PMR5 N terminal Domain 144 197 IPR025846 -
Tpr5g1424 494 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 198 490 IPR026057 GO:0016740
Tpr5g1424 494 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 105 492 - -
Tpr5g1424 494 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 105 492 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1424 Tpr-Chr5 27224817 27228558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1424 - - gmx:100794524 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1424 5 27224817 27228558 Tpr5g1424 5 27224817 27228558 ECH
Tpr6g0085 6 708371 712751 Tpr5g1424 5 27224817 27228558 PCT