Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0024 ATGGAAGAAAACCAAAGCACTCAAAACCAACAACACCATCTTCCTCCAGACAAATTACAAATGAACAAACCTGCTCCCTATGGCACAAGTTCTTCCAAACGTGCATTCTGCACATTCCTTACCATTTTTCTTCTACTAATTGGTGTCACTCTTTTAGTCCTATGGCTTGTCTACCGTCCACACAAACCCCACTTCACGGTTGTCGGTGTCGCCGTATATGGCCTCAACACTACCTCACCACCGCTCCTTTCTGCTACCTTGCAGTTCAACGTCCGCATAAAGAACCCGAACAGGCGTGTCTCTGTTTATTATGACAGATTCTCTGCTTTTGTATCTTACAAGAACCAAGCCATAACACCGCAGGTTATGCTACCACCTCTTTTTCTGGAGAAGCACAGTCAGGTTTCGTTGTCTCCGGTGCTCGGAGGCACGGCGGTGCCTGTGTCTGTGGAAGTATCGAATGGGTTGATGGTGGATGAGGCCTATGGGGTGGTGGGTCTGAAACTTGTGTTTCTAGGAAGGTTGAGGTGGAAAGCTGGAGCAATAAAAACAGCACATTATGGATTCTATGGAAAGTGTGATGTATTGATTGGTTTGAAGAAAGGTTATGTGGGTCAGGTTCCTCTGCTTGGCAATCCACCTTGCAATATCGACATATGA 660 0.4621 MEENQSTQNQQHHLPPDKLQMNKPAPYGTSSSKRAFCTFLTIFLLLIGVTLLVLWLVYRPHKPHFTVVGVAVYGLNTTSPPLLSATLQFNVRIKNPNRRVSVYYDRFSAFVSYKNQAITPQVMLPPLFLEKHSQVSLSPVLGGTAVPVSVEVSNGLMVDEAYGVVGLKLVFLGRLRWKAGAIKTAHYGFYGKCDVLIGLKKGYVGQVPLLGNPPCNIDI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0024 219 MobiDBLite consensus disorder prediction 1 16 - -
Tpr6g0024 219 PANTHER OS05G0367900 PROTEIN 21 218 IPR044839 GO:0098542
Tpr6g0024 219 MobiDBLite consensus disorder prediction 1 25 - -
Tpr6g0024 219 Pfam Late embryogenesis abundant protein 90 187 IPR004864 -
Tpr6g0024 219 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 21 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0024 Tpr-Chr6 300003 301314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0024 30 197 EF-hand Containing Proteins AT5G21130 22.807 1.26e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0024 - - cam:101499150 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0024 6 300003 301314 Tpr6g0024 6 300003 301314 ECH
Tpr5g1537 5 29324241 29325251 Tpr6g0024 6 300003 301314 ECH