Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1537 ATGGAAGAAATACTTCAAATGCATCACGAAGATGATCCAACTCCACATCATTCACAGCGTCACGATCCAACTCCGCACCATTCACAACGTTATTTCCCTATCAAGATGACACCACCACCACAACAACAACATCAACAAAATCATCAATATCCCATGGAACACAAAGGTAATATGATTCCTCGTTATAGAGTACCGAATGCTCCAAAACGCGAACATTGCATATGCATCACAATCTTTTTCCTCATACTTGGAATCATAATCTTAATCTTATGGCTTGCATATCATCCTTCAAAACCTCACATTACAGTCACAAGTGCTGCAATCTATGGCCTCAATGCAACTTCACCACCATTCATGTCAATCTCAATGCAATTCACAATCTTCATAAGGAACCCAAACAGGCGTGTTTCCATTTACTTTGATAGGCTTTCTGCCTTTGTTTCATATAGAAACCATCCGATTACGCCACATGTTGTGCTTCCGTCGTTTTTCTTGGAGAAGCACGGAACAGTTTCGTTGTCGCCTGAGTTAGGAGGCGTGCCGGTTCCGGTTTCGGTGGAAGTGTTGAATGGTTTGATGGTGGATGAGAATTATGGTGTGGTGGGTGTGAAACTTATATTACAAGGTAGGTTGAAGTGGAAAAGTGGTGAGATAAAATCTGCTCATTATGGTTTGTATGCTAAGTGTGATTTATTGTTGGGTTTGAAGAAAGGTATTGTGGGTCAGATTCCTCTGATTGGTGCTCCAGTTTGTGATGTGGATACATGA 768 0.4128 MEEILQMHHEDDPTPHHSQRHDPTPHHSQRYFPIKMTPPPQQQHQQNHQYPMEHKGNMIPRYRVPNAPKREHCICITIFFLILGIIILILWLAYHPSKPHITVTSAAIYGLNATSPPFMSISMQFTIFIRNPNRRVSIYFDRLSAFVSYRNHPITPHVVLPSFFLEKHGTVSLSPELGGVPVPVSVEVLNGLMVDENYGVVGVKLILQGRLKWKSGEIKSAHYGLYAKCDLLLGLKKGIVGQIPLIGAPVCDVDT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1537 255 MobiDBLite consensus disorder prediction 1 27 - -
Tpr5g1537 255 Pfam Late embryogenesis abundant protein 128 215 IPR004864 -
Tpr5g1537 255 PANTHER OS05G0367900 PROTEIN 40 255 IPR044839 GO:0098542
Tpr5g1537 255 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 40 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1537 Tpr-Chr5 29324241 29325251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1537 - - var:108347136 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1537 5 29324241 29325251 Tpr5g1537 5 29324241 29325251 ECH
Tpr5g1537 5 29324241 29325251 Tpr6g0024 6 300003 301314 ECH