Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3086 ATGTCGTCTAAGAAGGATAAAATCGCCTCTCAACAACGACGCGTCGGTTTACTCTACGACAACAGAATGTGTAAGCATTTCAATCCAGACGATAATCGCCATCCCGAAACTCCTAATCGCATTAAGGCTATTTGGGATAAACTTCAAACCACCGGCATTACCGATCGTTGTGTGATTTTGGATGCTGTTGATGCTGAAGATAAACATATATTAGCTGTGCATTCCAAAAAACATGTGGATCAAATCAAGAATATTAGCAATAAAAGTTTTAATTACAGGCGCAACCTTGCAGCTAGACTTAATTCAATATACTTCAACGAAGGCTCGACTAAATCGGCTTATCTTGCTGCTGGTTCAGCAATAGAGGTTGCTAAGAGAGTGGCTAGCAAGGAATTGAATTCTGCTGCTGCTATTATTAGGCCTCCAGGTCATCATGCAGAGCCAGATGAAGCTATGGGATTTTGTCTGTTCAACAATGTTGCAATTGCTGCATCTTATCTCTTAAATGAAAATCCAGAATTTGGTGTAAAGAAAATTTTAATTGTGGACTGGGATGTCCATCATGGAAATGGTACTCAAAAAATGTTCTGGACTGATTCTCGAGTATTATTCTTCTCCGTTCACAGGCATGAACATGGGAGTTTTTATCCAGCTGATGATAATGGATTTTATAACATGATTGGAGAAGGAGCTGGTGCTGGATACAATATAAATGTGCCATGGGAGAATGGGAGATGTGGTGATGCAGACTACTTTGCAGTGTGGGACCACATCTTACTCCCTGTTGCCAAAAAATTTAAGCCAGACATAATTTTAGTTTCTGCTGGATTTGATGCAGCTGTTGGAGACCCTTTAGGTGGATGCCGTGTCACACCATTTGGTTTTTCCCTTATGTTGAAAAAGTTGATGGATTTAGCTGAAGGTAGGGTTGTACTGGTTTTAGAAGGAGGGTATAATCTTGATTCCATTGCCAAATCGATGCATGCTTGTTTGGAAGTTTTACTTGAAGACAAGCCTCTTGTGGGATCTTCAGAGGCCTATCCATTTGAGTCTACATGGCGTGTGATCCAAGCGGTTCGCAAGGAGTTGAGTCCCTTTTGGCCTACACTTGCATCTGAATTGCCACAAGAATTAATTAGCCAAGTGGCAGATCCTCCGCATACTCTTGTCTCAAGTTCTGACTCTGAAGATGGCGAAGCTCCACCCAGATTAAAAACTATTGCAGAGCTCCTTGAGGAGGTCATGAAACCACTTTCCAACCTCAATGTTTATGCAGATGAAGAGAATGCTGCGTCTTGTTCGTGGCGATCTGAATTGTCAAATGTTTACTTATGGTATGCTTCATATGGTTCAAACATGTGGAGGCCAAGATTTGATTGCTACGTAGCAGGCGGGCAGGTGGAAGGTCTGCAGAAGCCGTGTTCTGGTTCAGTGAACAAAACTCTTCCGAATGAGATCCTTTGGAAGACTTTCCCTTGTCATATATTTTTTGGTCGTGATTCCTCACGTTCATGGGGTCCTGGCGGTGTTGCGTTTCTTAATCCTGAGAAAAACTCTCAGCACAAGACCCACATGTGCATGTACAAGATTTCGCTAGAGCAGTTCAATGATATTTTACTTCAGGAAAATGGTTTAAGCCTTGATGCGGGCTCTTCTTTATTTGATATGACTACTCTGAATGCCATCTCTAACAAGGAGTTCAGTTCTCGGGAGGTTGTCAAGGATGGTTGGTATGGTCATGTTGTCTACTTAGGAAAGGAGAACGACATTCCTATAATTACTATGACGTGTTCGCCTCTTGATATTGAGGGCTTCAAATCTGGGAAGCTACCATTGCGTGCGCCTAATAAATCGTACGCCAATACCTTGATAAAAGGGTTGGTAGAGGGAGAACAGTTCTCAGAGGCTGAAGCCATTGTTTACATAGATGCTGCTGCTAAATCACTTTGA 1950 0.4221 MSSKKDKIASQQRRVGLLYDNRMCKHFNPDDNRHPETPNRIKAIWDKLQTTGITDRCVILDAVDAEDKHILAVHSKKHVDQIKNISNKSFNYRRNLAARLNSIYFNEGSTKSAYLAAGSAIEVAKRVASKELNSAAAIIRPPGHHAEPDEAMGFCLFNNVAIAASYLLNENPEFGVKKILIVDWDVHHGNGTQKMFWTDSRVLFFSVHRHEHGSFYPADDNGFYNMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKKFKPDIILVSAGFDAAVGDPLGGCRVTPFGFSLMLKKLMDLAEGRVVLVLEGGYNLDSIAKSMHACLEVLLEDKPLVGSSEAYPFESTWRVIQAVRKELSPFWPTLASELPQELISQVADPPHTLVSSSDSEDGEAPPRLKTIAELLEEVMKPLSNLNVYADEENAASCSWRSELSNVYLWYASYGSNMWRPRFDCYVAGGQVEGLQKPCSGSVNKTLPNEILWKTFPCHIFFGRDSSRSWGPGGVAFLNPEKNSQHKTHMCMYKISLEQFNDILLQENGLSLDAGSSLFDMTTLNAISNKEFSSREVVKDGWYGHVVYLGKENDIPIITMTCSPLDIEGFKSGKLPLRAPNKSYANTLIKGLVEGEQFSEAEAIVYIDAAAKSL* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3086 649 Gene3D Histone deacetylase domain 7 413 IPR037138 -
Tpr5g3086 649 PANTHER BNAA09G05590D PROTEIN 12 602 - -
Tpr5g3086 649 PRINTS Histone deacetylase superfamily signature 141 164 IPR000286 -
Tpr5g3086 649 PRINTS Histone deacetylase superfamily signature 268 278 IPR000286 -
Tpr5g3086 649 SUPERFAMILY Arginase/deacetylase 12 367 IPR023696 -
Tpr5g3086 649 PANTHER HISTONE DEACETYLASE 12 602 - -
Tpr5g3086 649 Pfam Histone deacetylase domain 34 333 IPR023801 -
Tpr5g3086 649 Gene3D - 431 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3086 Tpr-Chr5 53697344 53703697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3086 K11406 - gmx:100788831 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3086 5 53697344 53703697 Tpr5g3086 5 53697344 53703697 ECH
Tpr5g3086 5 53697344 53703697 Tpr3g4401 3 48946726 48948644 PCT