Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g4401 ATGGCAGAAGAAACCGCCCCGGAAATCGTTGATCCCAACACCACCGTCGCCACCGTCGATATGGAAGTTGAAAACGCCGTTGAGTCCAAAGAAAAGCGATCCAGGGAAGAAGAAGAAGAGGAATCCAAAGACGAAGATGCTGTTTCAAAAAAGCCTAAAGTTGACGAGGAAAAGTCAGTAGAAGAACAGAGGTTGGAGAAGTTGGAGAAAAACGAAGATGAAGAAGAAAAGGAAAAGGAAGCATCTGGCGCTGTGAATTTGGGACCCAAAAAGTTTGATTCTTCATTGGAAATGTTTCATTATTTCCACAAATTTCTTCATGCTTGGCCTCAAAATCTCAATGTTAACAAGTATGAGCACACAATGTTGCTGGAATTGCTGAGGAATGGGCATTCAGAACCTGATAAAAAGATTGGCGTAGGGATTTGTGCTTTCCAAGTTCGTGACCATCCTCGCTATAATAGTAGGTGCTATTTCCTCATAAGGGAGGATGACTCTGTTGATGATTTCAGCTTCCGAAAGTGTGTGGATCATATAAGTCCTTTGCCAGAAGGGATGCAATTGAAATCTGAGGTGAACAAGAGGTTTGGTGGTGGTGGTGGAAAGCATCATGGTGGTGGCAGAGGAAGAGGTGGAAGAGGAGGTGGTCGTGGAAGAGGAGGAAGGGGTAGATATTGA 678 0.4425 MAEETAPEIVDPNTTVATVDMEVENAVESKEKRSREEEEEESKDEDAVSKKPKVDEEKSVEEQRLEKLEKNEDEEEKEKEASGAVNLGPKKFDSSLEMFHYFHKFLHAWPQNLNVNKYEHTMLLELLRNGHSEPDKKIGVGICAFQVRDHPRYNSRCYFLIREDDSVDDFSFRKCVDHISPLPEGMQLKSEVNKRFGGGGGKHHGGGRGRGGRGGGRGRGGRGRY* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g4401 225 MobiDBLite consensus disorder prediction 206 225 - -
Tpr3g4401 225 Coils Coil 51 85 - -
Tpr3g4401 225 MobiDBLite consensus disorder prediction 24 84 - -
Tpr3g4401 225 Pfam Protein of unknown function (DUF3223) 104 176 - -
Tpr3g4401 225 PANTHER PROTEIN EMBRYO DEFECTIVE 514 12 212 - -
Tpr3g4401 225 Gene3D - 80 180 - -
Tpr3g4401 225 Coils Coil 20 40 - -
Tpr3g4401 225 MobiDBLite consensus disorder prediction 1 86 - -
Tpr3g4401 225 MobiDBLite consensus disorder prediction 198 225 - -
Tpr3g4401 225 PANTHER - 12 212 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g4401 Tpr-Chr3 48946726 48948644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g4401 - - cam:101515238 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4401 3 48946726 48948644 Tpr3g4401 3 48946726 48948644 ECH
Tpr5g3086 5 53697344 53703697 Tpr3g4401 3 48946726 48948644 PCT