Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2929 ATGAACAATCCACCCACGAGGAACTCCGATTCCTCGTCTCACTTCGATTCTCCTCACTCTCCTCTCCGATTCCGATCCTCTCCACTCTCCGACGGCGGCGATCCTTTCCACTCCACCGAAAACTCGCCGGAAACTGACCACCGAGATAACTCCAGAGCAATCATAATCATCGAGCCTTCAATACAACACTCTCAAGTATCAGTCCCCGTACCGGATTCCGAGCACCGGAACCCGCCGGTGAATGAACAACCGGCGGTGGTGGTTAACAGAACCATAAGAAATGATCCTCCACTTACCGCAACGAATATGGGAGCGTCAGCCACCGGAGCAGGTCGTGTAGACGGAGGCGGTAGGGGAAGACCAAGGACAACGGCGGTGACGCCGGCGTGGTCGAAAAGTGATGTGATGACAGGAAAGGTTGCGTTAGGGTTCCGATTAAGCGAAGTGGTGCTTTGTCTGATTTCGTTTTCTGTTATGGCTGCGGATAAGACTCAAGGTTGGAGTGGTGATTCCTTTGATCGCTACAAAGAATACAGGTATTGTTTGTCAATGACGGTTATTGGGTTTGTATATGCGGGGTTTCAAGCGGGTGAACTGGCTTATCAACTTATCAGGGGAAAACACATAATCAATCACCACCTGCGTTTTCATTTTGATTTCCTCATGGATCAGGTTCTGGCATATCTTCTGATATCATCAGCATCATCAGCAGCCACAAGGGTTGATGACTGGCAATCAAATTGGGGGAAAGATGAATTCACAGAGATGGCTAGTGCTTCTGTTGCATTAGCCTTTCTTGCTTTTATCGCCTTTGCTATTAGCTCACTTATCTCCGGTTACAATCTCTGTAATCGCTACCCTTAG 864 0.4873 MNNPPTRNSDSSSHFDSPHSPLRFRSSPLSDGGDPFHSTENSPETDHRDNSRAIIIIEPSIQHSQVSVPVPDSEHRNPPVNEQPAVVVNRTIRNDPPLTATNMGASATGAGRVDGGGRGRPRTTAVTPAWSKSDVMTGKVALGFRLSEVVLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSMTVIGFVYAGFQAGELAYQLIRGKHIINHHLRFHFDFLMDQVLAYLLISSASSAATRVDDWQSNWGKDEFTEMASASVALAFLAFIAFAISSLISGYNLCNRYP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2929 287 MobiDBLite consensus disorder prediction 1 24 - -
Tpr5g2929 287 Pfam Casparian strip membrane protein domain 139 270 IPR006702 -
Tpr5g2929 287 PANTHER CASP-LIKE PROTEIN 4A3 67 285 - -
Tpr5g2929 287 MobiDBLite consensus disorder prediction 1 49 - -
Tpr5g2929 287 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 67 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2929 Tpr-Chr5 52332396 52334757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2929 - - gmx:100812568 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2929 5 52332396 52334757 Tpr3g2791 3 28709405 28714990 ECH
Tpr5g2929 5 52332396 52334757 Tpr5g2929 5 52332396 52334757 ECH
Tpr5g2929 5 52332396 52334757 Tpr5g2929 5 52332396 52334757 PCT