Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2791 ATGGCAACTCACCCAGCCATGAAGAAATCATGGTCGAGGGGCTCTGACTCCACTCAGTTCGAATCACCTGCACGTTTTTGCTCTCCCTTACGATGGGACGCAGCAGACTCACCGGAGTATCGTTCACCGGAAAACTCGCCGGGAAAGTTGGTAGACAATTCAATGGCCGTAGTCGCCGTCGACAAACTAAGGAAATTATCTCATGACAAACTCCCTCAGCAACATAAGCCACCGGAGAATGCTGTCATGGTTGTCAACCGGCCAGAGAGAGATCAGGAGTCTCAACGACAGATGACGAAGATGGCAACAACAGACGTCGAAGCTGAACGGAGACCGAGGTCGGCTTCTTCTGTTGGTAGGACGGCGGAGGAGGTTACGAGAAAGGCGGCGTTAGGGTTCCGGCTATGCGAGGTGGTTGTTTGTCTGATTTCGTTTTCAGTTATGGCTGCGAATAAGACACAAGGTTGGAGTGGTGACTCTTATGATCGTTATAAAGAATACAGGTATTGTTTATCTGTGAATGTTATCGGATTTGCATACTCAGCATTACAAGCATTTGATCTGGCCTATCAACTAGTAACAGAGAAACACATGATCAGTCACCACCTTCTCTATCACTTTCAATTCATCATGGATCAGGTTGTGGCATATCTTCTGATATCAGCATCATCCTCTGCAGCCACACGGGTGGACGATTGGCAATCGAATTGGGGGAAAGACGAGTTCACAGAGATGGCTACTGTTTCAGTTGGAATGTCTTTCCTAGCTTTTTCTGCTTTTGCTATGAGCTCACTCATCTCTGGTTACATCCTTTGTACCCGCCGCAACTCCGTGTGA 837 0.4791 MATHPAMKKSWSRGSDSTQFESPARFCSPLRWDAADSPEYRSPENSPGKLVDNSMAVVAVDKLRKLSHDKLPQQHKPPENAVMVVNRPERDQESQRQMTKMATTDVEAERRPRSASSVGRTAEEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSVNVIGFAYSALQAFDLAYQLVTEKHMISHHLLYHFQFIMDQVVAYLLISASSSAATRVDDWQSNWGKDEFTEMATVSVGMSFLAFSAFAMSSLISGYILCTRRNSV* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2791 278 MobiDBLite consensus disorder prediction 88 120 - -
Tpr3g2791 278 MobiDBLite consensus disorder prediction 103 117 - -
Tpr3g2791 278 Pfam Casparian strip membrane protein domain 126 258 IPR006702 -
Tpr3g2791 278 PANTHER CASP-LIKE PROTEIN 59 277 - -
Tpr3g2791 278 MobiDBLite consensus disorder prediction 1 22 - -
Tpr3g2791 278 MobiDBLite consensus disorder prediction 34 53 - -
Tpr3g2791 278 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 59 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2791 Tpr-Chr3 28709405 28714990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2791 - - gmx:100789870 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2929 5 52332396 52334757 Tpr3g2791 3 28709405 28714990 ECH
Tpr3g2791 3 28709405 28714990 Tpr3g2791 3 28709405 28714990 ECH