Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2813 ATGGGCGCTACGGAGAAATCGCAGACCAACGTTAATTCGTTACAGCGTGTGAAGGTCTACCGTCTGAATGATGATGGAAAATGGGATGACCAGGGCACTGGGCACGTCACTGTTGATTATTTGGAGCGATCAGAAGAGCTGGGTGTATTTGTTTATGACGAAGACGACAACGAGACTATACTTTTGCATCGCATAATTTCTGATGATATTTACAGAAAACAAGAAGATACAATTATTTCATGGAGAGATCCAGAATATGCCACTGAACTGGCGCTCAGCTTTCAAGAACCTGGCGGATGCTCTTACATATGGGACAATATTTGCAATGTGCAAAGGAATATGCATTTTAATACTTTAAATAATGAGGCATTTCACAGTGTAAGCAGTGAGTTGAGGGAGTTGCCTGCAGTTGAGTTGTCGACGCTTCCATTGATTCTTAAGACCGTGGTCGAGAGTGGCATTACGGATCAGTTGCGACTTACAGAATTAATTTTAACTGATCAAGATTTTTTTCGGAAGCTCGTTGAATTGTTCAGAGTTTGTGAAGATTTGGAAAATACTGATGGCCTTCACATGATTTTCAAAATAATGAAAGGGATCATTTTACTTAATAGTACACAAATTTTTGAGCGAATGTTCATTGATGAATTTATAATGGACATAATTGGTGCTCTTGAATATGATCCAGAGGTTCCTCATGTTCAACATCATCGTGAATTCTTAAAGGAGCATGTTGTTTTTAAGGAGGCCATACCAATAAAAAATTCAATTGTGTTATCAAAGATACATCAAACATATAGAATTGGTTTTTTGAAGGATGTTGTTTTGGCCAGAATATTAGATGAGGCAACTGCTGCAAATCTCAACTCTATGATACATGCAAACAACGCCACTGTTGTTTCTTTATTAAAAGATGACAGTACATTTATCCGGGAGTTGTTTGCTAGGTTAAAATCTCCCACTACCTCTCTTCAATCAAAGAAAAATATGATCCATTTCTTGCATGAGTTTTGTGGTTTAAGCAAGAGCTTACCGATGGTACAGCAGCTTCGACTTTTTAGGGATATGGTAAATGAGGGCATCTTTGACACTGTCACTGATGTCTTGCAAAGTCAAGAGAAGAAGCTTGTGCTTACTGGAACAGATATTCTCATTCTCTTCTTGAATCAGGATCCTAATCTTCTCCGGTCTTATGTGGTTCGACAGGAAGGAATCACACTTCTTGGATTGTTGGTTAAAGGAATGATAACAGATTTTGGAGATGACATGCATTGCCAGTTTCTTGATATTCTTCGTATTCTTTTAGACTCGTGCACATTGTCTGGCGCACAGAGGGACACTATTATTGACATTTTCTACGAGAAGCATTTGGGTCAACTGATCAAAGTGATAACAGCATCGTGTTCTCCAGAGAATGTTGCTAATGCGAACAACAAATCCATAGATCCTGACCAAGGAGACCAAAATCACAGTGGGACAAAGCCAGAGATTCTATTGAACATATGTGAACTACTATGCTTCTGTGTTCTACACCACCCATACCGGATAAAGTGCAGTTTTCTTCTGAATAATGTGATTGATAAAATTTTGCTACTGACAAGAAGAGGAGAAAAATATCTGGTTGTTGGTGCTATTCGGTTTGTGCGTACCATTCTCTCACGTCATGACGAGCATCTGATAAATCATTTTGTTAGGAACAACCTTCTCAAACCCATTGTAGACATCTTTGTTGCTAATGGCAGTCGCTACAATCTGCTCAATTCTGCTGTTCTCGAACTTTTTGAGTTTATTTGCAAGGAGCATATGAAAATATTAATAATATATATAGTTGATTCTTTCCGGGACCTGTTAGTGAAGTTTGAGGATTTGGCTACCATTTATTTACTGAAAGTAAAATATGAGCAGTATTTGGATAATGATGGGGCAAAAGGCACTGTTACAAATGATCTTCGAAGACGGCTTGAGGAACGGGCTTTAGAGAAAGAAGAGGAAGACTACTTTAATGAGGACAGTGATGATGAGGACTCAACCTCCACGTCTATTTCACGTAATCAGAAAGAGCAGCAGCAACGTGTGTTATCCAATGGAGCTGCTGCAAGCCAGAAAGAACAGCAGCAGCAACGTGTGTTATCCAATGGAGCTGCTGCGAGCCACTCTGATTTAAGTCCGAGGTCTGGTGGACTAGTTGACTATGATGATGATGATGAAGATGACGAAGATTACAAGCCACCCCCAAGGAAACAGCCAGAAACTTCTGAAGAGGATGAAGGGGTAATGGAGTCTCTTGGAATGAAAAGGAAGTTGCCTTTGAAGGAAAAGGAGATGGATCTCGAACATAAGCAGAAGATGTCTAAAAGTTCAAAATCAAAAGATGTTTTTGCTGCCTTATGTTCAACTTTGAGCCATGCTGTACTACCTGGTAATAAAACTGCAATCAAGGATCATACTGGTCATTCGACAGTTGATGGGAAGATGAGCTCAACTGAAGACAATGAAGAAAAGGAGATAAATGTTTCTAAAATCTGCTCTGAAAAAAGCAACACAACAGCTGAAGTGAACCATGTATTGTAA 2571 0.3932 MGATEKSQTNVNSLQRVKVYRLNDDGKWDDQGTGHVTVDYLERSEELGVFVYDEDDNETILLHRIISDDIYRKQEDTIISWRDPEYATELALSFQEPGGCSYIWDNICNVQRNMHFNTLNNEAFHSVSSELRELPAVELSTLPLILKTVVESGITDQLRLTELILTDQDFFRKLVELFRVCEDLENTDGLHMIFKIMKGIILLNSTQIFERMFIDEFIMDIIGALEYDPEVPHVQHHREFLKEHVVFKEAIPIKNSIVLSKIHQTYRIGFLKDVVLARILDEATAANLNSMIHANNATVVSLLKDDSTFIRELFARLKSPTTSLQSKKNMIHFLHEFCGLSKSLPMVQQLRLFRDMVNEGIFDTVTDVLQSQEKKLVLTGTDILILFLNQDPNLLRSYVVRQEGITLLGLLVKGMITDFGDDMHCQFLDILRILLDSCTLSGAQRDTIIDIFYEKHLGQLIKVITASCSPENVANANNKSIDPDQGDQNHSGTKPEILLNICELLCFCVLHHPYRIKCSFLLNNVIDKILLLTRRGEKYLVVGAIRFVRTILSRHDEHLINHFVRNNLLKPIVDIFVANGSRYNLLNSAVLELFEFICKEHMKILIIYIVDSFRDLLVKFEDLATIYLLKVKYEQYLDNDGAKGTVTNDLRRRLEERALEKEEEDYFNEDSDDEDSTSTSISRNQKEQQQRVLSNGAAASQKEQQQQRVLSNGAAASHSDLSPRSGGLVDYDDDDEDDEDYKPPPRKQPETSEEDEGVMESLGMKRKLPLKEKEMDLEHKQKMSKSSKSKDVFAALCSTLSHAVLPGNKTAIKDHTGHSTVDGKMSSTEDNEEKEINVSKICSEKSNTTAEVNHVL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2813 856 MobiDBLite consensus disorder prediction 740 787 - -
Tpr5g2813 856 MobiDBLite consensus disorder prediction 681 719 - -
Tpr5g2813 856 Gene3D - 11 129 IPR011993 -
Tpr5g2813 856 PANTHER BINDING PROTEIN-RELATED 706 840 - -
Tpr5g2813 856 PANTHER BINDING PROTEIN-RELATED 1 702 - -
Tpr5g2813 856 SUPERFAMILY ARM repeat 306 599 IPR016024 -
Tpr5g2813 856 MobiDBLite consensus disorder prediction 661 789 - -
Tpr5g2813 856 Pfam Phosphatase 4 regulatory subunit 3 168 355 IPR006887 -
Tpr5g2813 856 MobiDBLite consensus disorder prediction 817 836 - -
Tpr5g2813 856 SUPERFAMILY PH domain-like 15 111 - -
Tpr5g2813 856 PANTHER ATP SYNTHASE GAMMA-RELATED 706 840 - -
Tpr5g2813 856 PANTHER ATP SYNTHASE GAMMA-RELATED 1 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2813 Tpr-Chr5 51142807 51159697 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2813 K17491 - gmx:100802657 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2813 5 51142807 51159697 Tpr5g2813 5 51142807 51159697 ECH
Tpr4g1938 4 20194472 20207743 Tpr5g2813 5 51142807 51159697 PCT