Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1938 ATGGGTGCGCCAGAGAAACCACAGACTAACGCTAATTCGATGCAGCGTGTCAAGGTGTACCGTCTGAATGATGATGGAAAATGGGATGACCAGGGTACTGGGCATGTAACTATTGATTATATGGAGCGATCAGAGGAGCTGGGCTTATTTGTTTATGATGAAGAAGACAACGAGACTATACTTTTGCATCGCATCAGTTCTGATGATATTTATAGGAAGCAAGAAGATTCAATTATCTCATGGAGAGATCCAGAATATTCCACAGAACTGGCGCTTAGCTTTCAAGAGCCTAGCGGATGCTCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCATTTCAATACTTTAAATAATGAGCCATTTCAGAGCACTAACAGCGAGTTAAGGGAGTTGCCTGCTGTTGAACTAACAACACTACCTTTGATTCTTAAGACTGTTGTTGACAGCAGCATTTCAGATCAAATACGAGTAACAGAGCTACTATCAAGTAATCAAGAATTTTTCCGGAAGCTGATGGAGTTATTTAGAATGTGTGAAGACTTGGAAAACATGGATAGCCTTCACACGATTTACAAAATCGTCAAAGGGATCATTTTACTTAATAGTCCACCAATTCTTGAGAAAATTTTTAAGGACGAGTTTATAGTGGACATTATCGGTGCCCTTGAGTATGATCCAGAAAGTACTACTGTTCAGCATCATCGTAAATTCTTAAAGGACCATGTTGTTTTTAAGGAGGCCATACCTATAAAAGATCCCAATGCACTGGCGAAGATACATCAGACATATAGAGTTGGCTATTTGAAGGATGTTGTTTTGGCCAGAGTCTTAGACGATGCTACTTGTGCAACCATTAACTCCATAATACATGCAAACAATGCCTTTGTTATTGCTATGTTGAAGGACGACAATACATTCATCCAGGAGTTGTTTGCTAGGTTAAAATCACCCAGCACGTCTCAAGAGTCAAAGAAGAACTTGGTACATTTCTTGTATGAGTTTTGTAGTGTAAGCAAGAGCTTACAGATGGTCCAGCAGCTTCGGCTTTTTAGGGATCTGATGAATGAAGGAATCTTTGACATTGTCAGTGATGTTCTGCAAAGTCAAGACAAAAAACTTGTGCTAACTGGAACAGACATCCTCCTTCTTTTTATGAATCAGGATCCTAATCTTTTGCGATCATATGTTGTTCGGCAGGAAGGAGTTGCTCTTCTAGGACTCTTGGTTAAGGGAATGGTAACAGATTTCGGAGAGAGCATGCACTGCCAGTTTCTTGAGATTCTTCGTATTCTATTGGACTCGAGTACATTGTCTGGACCACAGAGGGACACTATCATTGACATCTTCTTTGAGAAGCATTTGGGTCAACTGATTGAGGTTATAACAGCGTCATGTCCTTCAGAAAATATTGCCGATGCAAGTATTAAATCAACAAATCCTGGACAAAGTGTTCAATTTCAGCGCAAAACAAAACCAGAGATATTATTGAACATATGTGAATTACTATACTTTTGTGTCCTTCATCACCCATACAGGATAAAGTGCAATTTCCTTGTCAATAGTGCAATTGAAAACATTTTGCTCCTCACACGGAGAGCAGAAAGATACTTAGTTGTCTGTGCGGTCCGGTTTGTTCGAACTGTTCTCTCCCGCAATGATGAGCATATGCTAAATTATTTCGTGAAGAATAACATTCTCAAACCAATTATAGACGCCTTTGTTGCTAATGGTAATCGTTACAATCTTCTCAACTCTGCTGTTCTGGAACTTTTCGAGTATATTCGGAAGGAGAATGATCTGAAATTATTGCTAAAACACCTAGTTGATTCTTATTGGGGTCAGCTGGTAAAATTTGAGCATTTGGTCTCAATTCACTCGCTGAAAGTAAAATATGAGCAGTGTGTGGATAATGGTGGGACTAATGGTGCTGCGGTAGTGGACCTTCGAAGACGAATTGATGAGCGTGCTGTGGAGAGAGAAGAAGAAGAACGCTATTTTAATGAGGACAGTGATGAGGATGATGTAGCGTCTGTATCTGTTTCACGTGATCATAAAGGTCATCAACAGCCTAGTCTTTCCAATGGAGTTACACCAAAGCATCCGCAGTCAAGTCGAAGGTCACTGGTTGACTATGAGGATGATGAGGACGATGAAGATTATAAACCACCACCAAAGAAGCAAAAAGAAACATCAGAGGAAGATGAAGGGATACTGGAGTCTCTCAGGCTGAAAAGGAAACTTCCTTCAAAGGATAAAGATCCCGAACTTGTGAAGAAACAGAAGCTAACAAAGAACTCAAAATCTAAAGATAGTGTTTTTGCTGCCTTGTGTTCAACATTGAGCCAAGCTGTGTTACCAAGTAAGAAATCTGCAATCAATATCCATACGGGTGCTCAAACAGTTGAAGGGAGGACGAGTTCTAGTGAAGACAATCAGGAAGACAGACAAAATGTTACTAGAAGCAGCGCTGATAATAGCAACATAGGAGCTGAAGATAACCTTGTAGAGAAAGATTCTTCAGCCTCTAGAAGTTTTTCTGATCGATTGCATGCAAAATCAGATAACAAACAAATAGGAGGTGAGGAACGTCCGCTGCTTCCTCCCAAATCCTCGCCAGAGATGGCTGTGAATGGATCATAA 2649 0.4028 MGAPEKPQTNANSMQRVKVYRLNDDGKWDDQGTGHVTIDYMERSEELGLFVYDEEDNETILLHRISSDDIYRKQEDSIISWRDPEYSTELALSFQEPSGCSYIWDHICNVQRNMHFNTLNNEPFQSTNSELRELPAVELTTLPLILKTVVDSSISDQIRVTELLSSNQEFFRKLMELFRMCEDLENMDSLHTIYKIVKGIILLNSPPILEKIFKDEFIVDIIGALEYDPESTTVQHHRKFLKDHVVFKEAIPIKDPNALAKIHQTYRVGYLKDVVLARVLDDATCATINSIIHANNAFVIAMLKDDNTFIQELFARLKSPSTSQESKKNLVHFLYEFCSVSKSLQMVQQLRLFRDLMNEGIFDIVSDVLQSQDKKLVLTGTDILLLFMNQDPNLLRSYVVRQEGVALLGLLVKGMVTDFGESMHCQFLEILRILLDSSTLSGPQRDTIIDIFFEKHLGQLIEVITASCPSENIADASIKSTNPGQSVQFQRKTKPEILLNICELLYFCVLHHPYRIKCNFLVNSAIENILLLTRRAERYLVVCAVRFVRTVLSRNDEHMLNYFVKNNILKPIIDAFVANGNRYNLLNSAVLELFEYIRKENDLKLLLKHLVDSYWGQLVKFEHLVSIHSLKVKYEQCVDNGGTNGAAVVDLRRRIDERAVEREEEERYFNEDSDEDDVASVSVSRDHKGHQQPSLSNGVTPKHPQSSRRSLVDYEDDEDDEDYKPPPKKQKETSEEDEGILESLRLKRKLPSKDKDPELVKKQKLTKNSKSKDSVFAALCSTLSQAVLPSKKSAINIHTGAQTVEGRTSSSEDNQEDRQNVTRSSADNSNIGAEDNLVEKDSSASRSFSDRLHAKSDNKQIGGEERPLLPPKSSPEMAVNGS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1938 882 MobiDBLite consensus disorder prediction 685 707 - -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 789 882 - -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 839 862 - -
Tpr4g1938 882 PANTHER BINDING PROTEIN-RELATED 1 812 - -
Tpr4g1938 882 Gene3D - 10 130 IPR011993 -
Tpr4g1938 882 SUPERFAMILY PH domain-like 15 111 - -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 821 836 - -
Tpr4g1938 882 SUPERFAMILY ARM repeat 126 599 IPR016024 -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 722 769 - -
Tpr4g1938 882 Pfam Phosphatase 4 regulatory subunit 3 167 356 IPR006887 -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 789 809 - -
Tpr4g1938 882 PANTHER ATP SYNTHASE GAMMA-RELATED 1 812 - -
Tpr4g1938 882 MobiDBLite consensus disorder prediction 662 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1938 Tpr-Chr4 20194472 20207743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1938 K17491 - gmx:100786790 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1938 4 20194472 20207743 Tpr4g1938 4 20194472 20207743 ECH
Tpr4g1938 4 20194472 20207743 Tpr5g2813 5 51142807 51159697 PCT