Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2650 ATGAGTTCCGCTGGTGACCTCCTCAGTGTCGAACCTCTCGAACTCACTTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACTGATAGCTATGTAGCTTTCAAGGTTAAAACAACTAATCCAAAGAAGTATTGTGTTCGTCCAAACACTGGAATTGTCATGCCAAGATCTACCTGCGATGTTATGGTTACCATGCAAGCGCAAAAAGAAGCTCCGGTTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGTGTAAAGACCAATGATGGTGTCAGTCCGAAAGATATCTCTGCAGATATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGGTGTATGTATCTCCACCGCAACCACCATCTCCAGTTGCAGAGGGTTCTGAGGAAGGGTCGTCGCCTAGAGGGTCTGTTTCAGAAAATGGAAATGTCAATGGTCTTGACTTCTCACAAGGAACCAGAGGATTTGCCGAACGAACCGAGGCTCAAGAAAAATCTGCAGAGGCAAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAACTAGCAGGCTCCGCCAGGAACTGGAGTTGCTGAAGCGTGAAGGAAACAAAAATCGTGGCGGAGTGTCATTTATCATTGTCATATTAATCGGCTTACTTGGCATAATCATGGGGTATCTCATGAAATAG 723 0.444 MSSAGDLLSVEPLELTFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVMPRSTCDVMVTMQAQKEAPVDMQCKDKFLLQSVKTNDGVSPKDISADMFNKEAGHVVEECKLRVVYVSPPQPPSPVAEGSEEGSSPRGSVSENGNVNGLDFSQGTRGFAERTEAQEKSAEARALISRLTEEKNNAIQQTSRLRQELELLKREGNKNRGGVSFIIVILIGLLGIIMGYLMK* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2650 240 Gene3D Immunoglobulins 2 131 IPR013783 -
Tpr5g2650 240 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 240 IPR016763 GO:0005789
Tpr5g2650 240 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 3 240 - -
Tpr5g2650 240 ProSiteProfiles Major sperm protein (MSP) domain profile. 7 127 IPR000535 -
Tpr5g2650 240 Pfam MSP (Major sperm protein) domain 8 112 IPR000535 -
Tpr5g2650 240 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Tpr5g2650 240 MobiDBLite consensus disorder prediction 131 157 - -
Tpr5g2650 240 SUPERFAMILY PapD-like 4 142 IPR008962 -
Tpr5g2650 240 Coils Coil 171 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2650 Tpr-Chr5 48674779 48681868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2650 - - lang:109330584 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2650 5 48674779 48681868 Tpr5g2650 5 48674779 48681868 ECH
Tpr2g3780 2 40731355 40734892 Tpr5g2650 5 48674779 48681868 PCT
Tpr5g2650 5 48674779 48681868 Tpr2g5556 2 64300606 64305106 PCT