Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5556 ATGACTGCAACCACCCTCATTACTATTAGTCCCGACGAGCTCAGGTTTCATTTTGAGCTGGAAAAGCAAACATTTTGTGATCTTAAAGTACTCAATAACACACAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCTAAGAAGTACTTTGTACGACCAAACACCGGTGTTATTCATCCTTGGGATTCATGTATTATCAGAGTCACACTCCAAGCCCAACGTGAATACCCTCCAGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGGCTCCAAATACTGATGTTGATGATCTTCCGGCAGATACTTTTAATAAGGATAGTGGTAATTTAATAGAGGATTTGAAACTAAGAGTCTCATATATCACTACCTCACCCGAAGGAAGCTCTGAAGACGATGGGAGGAATTCCTCACAAAAACTTGATTCCTCTTCTAGTCAGGCTGTACAGCTCCTGAAGGAAGAAAGAGACGCCGCTGCCAGACAAACGCGACAGCTTCAACAGGAAGTGGACATGCTGAAAAGGCGAAGAAACCAAAGAGGCGATCCTGGCTTTTCCTTCACCTTCGCCATTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTTTTGAAATTTTTATTCTCTTCACCGTCTACAGAATAA 657 0.417 MTATTLITISPDELRFHFELEKQTFCDLKVLNNTQNYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVAPNTDVDDLPADTFNKDSGNLIEDLKLRVSYITTSPEGSSEDDGRNSSQKLDSSSSQAVQLLKEERDAAARQTRQLQQEVDMLKRRRNQRGDPGFSFTFAIFVGLLGFLLGFLLKFLFSSPSTE* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5556 218 Coils Coil 153 180 - -
Tpr2g5556 218 Gene3D Immunoglobulins 2 128 IPR013783 -
Tpr2g5556 218 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Tpr2g5556 218 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 215 IPR016763 GO:0005789
Tpr2g5556 218 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Tpr2g5556 218 SUPERFAMILY PapD-like 4 133 IPR008962 -
Tpr2g5556 218 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 215 - -
Tpr2g5556 218 PIRSF VAMP_assoc_prot 127 210 IPR016763 GO:0005789
Tpr2g5556 218 PIRSF VAMP_assoc_prot 1 155 IPR016763 GO:0005789
Tpr2g5556 218 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5556 Tpr-Chr2 64300606 64305106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5556 - - gmx:100794270 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2650 5 48674779 48681868 Tpr2g5556 2 64300606 64305106 PCT