Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2331 ATGAGTATCAATGGTAGAGACCATACACTAAAGGGAATTGTGGTTTTGATGCACAAGAATGTGTTGAACATCGATGTTGTTGATGATATTGCTGACAATGAAGGTGATACCGTTCCTCCTTCCTTCTTGGATAATTCTATTGCTCTCAAGTTGATTAGTGCTTCTAAAACTGATGGGACTGGAAAAGGAAAAGTGGGAGAGAAAACATATTTGGGAGGTCTTGTCACCTCCATACCAACTTTGGAAGACAAACAATCTGCTTTCAGTATTAATTTTGAATGGCATAGTCTTGACATGGGAATTCCAGGAGCGTTTTATATCGAGAATTTCATGCAAGATGAATTCTTCCTTGTGAGCTTGTCCCTTGAAGATGTTCCCAACCATGGAACAATCAACTTTGTTTGCAATTCATGGATTTACAATACTGAAAAATACATAACAGACCGCATCTTCTTTACCAACAAGACATACCTTCCAAGTGAAATGCCAGCTCCATTACTGTACTACAGATATGAAGAATTGAAGACTTTAAGAGGAGATGGAACCGGAGAACGCCAAGTATGGGAAAGAATATATGATTATGATGTCTACAATGATTTGGGTGAGCCAGATAAAAATGCTGCCTTGGCTCGTCCGGTTCTTGGAGGATCAAGCACATTGCCTTACCCTCGAAGGTGCAGAACAGGCAGACAACCAACTCAGACAGATCCAAACACTGAGAGTAGGAGTGGCTATGTTTACATTCCAAGAGACGAATTACTTGGTCATGTTAAATCTTCGGACTTTCTTACGAATAGACTCAACTTAGCATCTCAATATGCAACACCTCAATTAAGATCTCTAGTTACATCAAAACGCAATCATGAGTTTGATACCTTTGAAGATGTGCTCTCGCTTTTCCCGGACAAGTTTCCACTGCCATTATTGCTTCAAGTGGATAATTCTGCATGGATGGATGATGAGGAATTTGCAAGAGAGATGATTGCTGGTGTAAATCCAAACGTCATAACAAAACTTCAGGAGTTTCCACCACAGAGCAAATTAGATAGCCAACTCTATGGTGATAATACAAGCACAATAACCAAAGAAAACTTGGAGCCAAACATGGATGGAGTGACAGTAGAACAGGCTATCCAAGAAAATAGACTCTACATACTTGATCATCATGATGCATTCTATCCATCTTTGAGGAAAGTAAATGCAACTGATGCAAAGGCCTATGCTACAAGGACCATTCTATTTTTGCAAACTGATGGAACTTTGAAGCCATTGGCCATTGAACTAAGTACACCAAATCCTAATGGTGATAGTTTTGGTCCTATTAGTAAGGTTTACACCCCTGAAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCTAAGGCTTATGTTATTGTAAATGACGCCAATTATCATGAACTTATCAGCCATTGGTTGCACACTCATGCTACTGTCGAGCCATTCATCATAGCAACTAATAGGAATCTTAGTGTGGTTCATCCTATTTATAAACTATTACTTCCACATTATCGTAACACAATGAACATAAATGCCAATGCAAGAAATGTCTTGATCAACGCAGACGGTATTATAGAAAGAGCATACTTATTGGAAAGTATTACATTGCAATTGTCTGCTGATGTTTACAAGGATTGGGTTTTCACCGAACAAGGACTACCTAATGATCTAATCAAAAGAGGAGTGGCTGTTGAGGATCCAGCTTCACAACACGGCATTCGTCTTTTGATAGAGGATTATCCTTATGCTTCTGATGGACTAGAGATATGGGCTGCTATTAAGTCTTGGGTTGAAGAATATGTGATTTTCTATTACAAGTCAGATGCAGATATTGTACAAGATTCTGAACTCCAAGCATTCTGGAAAGAACTTGTAGAAGTAGGCCATGGTGACATGAAGAATGCTACATGGTGGTTTAAGATGCAAACTCGTGCAGAGTTGATTGAAGCTAGCACCATCCTCATATGGATTGCTTCAGTACTTCATGCATCTGTTAACTTTGGACAATATCCTTACGGAGGATACATCCTTAACCGGCCAACTAAAAGCATGAGATTCATGCCGGAGAAAGGATCCCCTGAGTATGATGACCTTGCTAACGACTATCAACAGACATATTTGAGGACAATCACACCAAAGAAAGAATCTATTTTGAACATGACCGTTTTGGAGGTATTGTCAACACATGTTTCTGATGAGCAATACCTCGGACAAAGAATCGAAGGTGGTCTTTGGACTACTGATTCAGTACCGATTGAAGCCTACAATAAGTTTGGAAGGAAGTTGGCTGAAATTGAGCAAAATCTCATTGAAAAGAACAATGATAAGTCATTGAGAAATAGGTATGGGCCTGTTAATATGCCATACACTCTGCTTTATCCTTCTAGTGAAGAAGGATTGACTTTCAGAGGAATTCCCAATAGTATCTCAATCTAA 2454 0.3928 MSINGRDHTLKGIVVLMHKNVLNIDVVDDIADNEGDTVPPSFLDNSIALKLISASKTDGTGKGKVGEKTYLGGLVTSIPTLEDKQSAFSINFEWHSLDMGIPGAFYIENFMQDEFFLVSLSLEDVPNHGTINFVCNSWIYNTEKYITDRIFFTNKTYLPSEMPAPLLYYRYEELKTLRGDGTGERQVWERIYDYDVYNDLGEPDKNAALARPVLGGSSTLPYPRRCRTGRQPTQTDPNTESRSGYVYIPRDELLGHVKSSDFLTNRLNLASQYATPQLRSLVTSKRNHEFDTFEDVLSLFPDKFPLPLLLQVDNSAWMDDEEFAREMIAGVNPNVITKLQEFPPQSKLDSQLYGDNTSTITKENLEPNMDGVTVEQAIQENRLYILDHHDAFYPSLRKVNATDAKAYATRTILFLQTDGTLKPLAIELSTPNPNGDSFGPISKVYTPESEGVEASIWLLAKAYVIVNDANYHELISHWLHTHATVEPFIIATNRNLSVVHPIYKLLLPHYRNTMNINANARNVLINADGIIERAYLLESITLQLSADVYKDWVFTEQGLPNDLIKRGVAVEDPASQHGIRLLIEDYPYASDGLEIWAAIKSWVEEYVIFYYKSDADIVQDSELQAFWKELVEVGHGDMKNATWWFKMQTRAELIEASTILIWIASVLHASVNFGQYPYGGYILNRPTKSMRFMPEKGSPEYDDLANDYQQTYLRTITPKKESILNMTVLEVLSTHVSDEQYLGQRIEGGLWTTDSVPIEAYNKFGRKLAEIEQNLIEKNNDKSLRNRYGPVNMPYTLLYPSSEEGLTFRGIPNSISI* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2331 817 Coils Coil 761 781 - -
Tpr5g2331 817 Gene3D - 334 468 - -
Tpr5g2331 817 Gene3D - 301 333 IPR027433 -
Tpr5g2331 817 Gene3D - 469 815 - -
Tpr5g2331 817 PANTHER LIPOXYGENASE 6 300 IPR000907 GO:0016702|GO:0046872
Tpr5g2331 817 PANTHER LIPOXYGENASE 303 817 IPR000907 GO:0016702|GO:0046872
Tpr5g2331 817 ProSiteProfiles PLAT domain profile. 26 153 IPR001024 GO:0005515
Tpr5g2331 817 ProSitePatterns Lipoxygenases iron-binding region signature 2. 499 509 IPR020834 GO:0016702|GO:0046872
Tpr5g2331 817 SMART LH2_4 8 154 IPR001024 GO:0005515
Tpr5g2331 817 ProSitePatterns Lipoxygenases iron-binding region signature 1. 472 486 IPR020833 GO:0016702|GO:0046872
Tpr5g2331 817 Pfam Lipoxygenase 303 800 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 Pfam Lipoxygenase 166 301 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 123 141 IPR001246 GO:0016491
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 149 170 IPR001246 GO:0016491
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 188 204 IPR001246 GO:0016491
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 221 240 IPR001246 GO:0016491
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 287 308 IPR001246 GO:0016491
Tpr5g2331 817 PRINTS Plant lipoxygenase signature 729 743 IPR001246 GO:0016491
Tpr5g2331 817 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 8 157 IPR036392 GO:0005515
Tpr5g2331 817 Gene3D PLAT/LH2 domain 11 175 - -
Tpr5g2331 817 Gene3D - 176 274 - -
Tpr5g2331 817 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 156 817 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 303 817 - -
Tpr5g2331 817 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 6 300 - -
Tpr5g2331 817 PRINTS Lipoxygenase signature 454 471 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 PRINTS Lipoxygenase signature 472 489 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 PRINTS Lipoxygenase signature 492 512 IPR013819 GO:0016702|GO:0046872
Tpr5g2331 817 SUPERFAMILY Lipoxigenase 158 817 IPR036226 -
Tpr5g2331 817 Pfam PLAT/LH2 domain 59 152 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2331 Tpr-Chr5 44768585 44773154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2331 10 817 Acyl Lipid Metabolism Gene Families AT1G55020 52.353 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2331 K15718 - gmx:100816880 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2331 5 44768585 44773154 Tpr7g4811 7 56114871 56124830 PCT