Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1252 ATGAACCTCAAGGAAGAAGAAGTATTAGAGTTTCTTGGATGCGTTCCGCTACTACAAAGGTTACCTAACTCGTCTATAAGGAAGATTTCAGAACTTGTGGTTGTTAAACACTATGAGCGAGGGGAGTATGTTGCTCGTGAGGATGAACCAGGATATGGCACTTACTTCATATGGGATGGAAAGGCTGAGGTTGTTGGATCTGTTAGTGCCAATGATGAAAATCGTCCAGAGTTCCAGTTGAATAAATATGACTATTTTGGTTGTGGTTTGTCAAATACAGTCCACAACACAGATGTTGTTGCTTTATCTAAGCTAACATGCTTAGTACTGCCCCGTGAGCACTTGGCACTGCTATGGCCAAAGTCTATATGGAGTGCAGAAAAACGTCCTGAGAGACGCTCAGCTGTGGAGAATATATTGCAATTAGAACCTTTAAAGGTAGATACCTTTCAAGGAATCACTCCTCCAGATGCTCCAAATTTTGGAAAGGTGTTTGGGGGACAGCTGGTTGGACAGGCACTAGCCGCAGCATCAAAATCTGTTGACTGTCTTAAGTTACTTCATAGTATGCATGCCTATTTTCTTCGTATAGGAGACTTAAACATGCCTATTATATATCAAGTCCACCGGCTCCGCAACGGAAAGAACTTTGCTACACGGAAAGTGGATGCAATGCAAAAAGGAAATGTCATATTCACTTTGCTGGCTTCATTTCAGAGAGAAGAATCAGCGTTTGATCACCAGGAAGTAGCCATGCCATCTGTCTCTGCACCAGAAATGCTTCTGCCATTAGAAGAGCTACGGGAGAGACGTCTAACCGACCCTCGGCTACCAATAATTTATCGGAATAAAGTTGCTACAACTGAGTTCGTTCCCTGGCCCATAGAGATACGGTTCTGTGAGCCTAGAATTGCAACAAATATGACAAAATCTCCTCCCAGTTTGAGATACTGGTTTCGTACAAAGGGAAAACTTTCAGATGATCAGGCCTTGCATAGGTGTGTTGTGGCATATGCTTCAGATCTAATATTTCTTCAAGTAAGTTTGAATCCACATCGTGGGAAAGGTTTCAGGGCACGTGGTGTTAGTCTGGATCATGCAATGTGGTTTCACCGACCCTTAAAAGCTGATGAGTGGGTTCTATTTGAGATCTTCACTCCCAGTGCCTATGAAGCACGCGGTTTTGTCATAGGTCAAATGTTCAATCAGAAGGGACAGCTTCTTGTAACATTAATTCAAGAAGGTTTAACCAGGAATGCTAGTTCCGAAATTTCAGACATCAAATCTAAGTTGTGA 1296 0.4259 MNLKEEEVLEFLGCVPLLQRLPNSSIRKISELVVVKHYERGEYVAREDEPGYGTYFIWDGKAEVVGSVSANDENRPEFQLNKYDYFGCGLSNTVHNTDVVALSKLTCLVLPREHLALLWPKSIWSAEKRPERRSAVENILQLEPLKVDTFQGITPPDAPNFGKVFGGQLVGQALAAASKSVDCLKLLHSMHAYFLRIGDLNMPIIYQVHRLRNGKNFATRKVDAMQKGNVIFTLLASFQREESAFDHQEVAMPSVSAPEMLLPLEELRERRLTDPRLPIIYRNKVATTEFVPWPIEIRFCEPRIATNMTKSPPSLRYWFRTKGKLSDDQALHRCVVAYASDLIFLQVSLNPHRGKGFRARGVSLDHAMWFHRPLKADEWVLFEIFTPSAYEARGFVIGQMFNQKGQLLVTLIQEGLTRNASSEISDIKSKL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1252 431 PANTHER ACYL-COA THIOESTERASE 53 431 - -
Tpr5g1252 431 SUPERFAMILY cAMP-binding domain-like 7 119 IPR018490 -
Tpr5g1252 431 Gene3D Jelly Rolls 2 126 IPR014710 -
Tpr5g1252 431 CDD Thioesterase_II_repeat1 315 416 - -
Tpr5g1252 431 ProSiteProfiles cAMP/cGMP binding motif profile. 17 87 IPR000595 -
Tpr5g1252 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 250 419 IPR029069 -
Tpr5g1252 431 CDD Thioesterase_II_repeat2 148 240 - -
Tpr5g1252 431 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 136 243 IPR029069 -
Tpr5g1252 431 Pfam Thioesterase-like superfamily 159 416 - -
Tpr5g1252 431 Pfam Cyclic nucleotide-binding domain 36 116 IPR000595 -
Tpr5g1252 431 CDD CAP_ED 17 115 IPR000595 -
Tpr5g1252 431 PANTHER ACYL-COA THIOESTERASE 53 431 IPR003703 GO:0006637|GO:0047617
Tpr5g1252 431 Gene3D - 131 421 IPR042171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1252 Tpr-Chr5 24740135 24755634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1252 3 431 Acyl Lipid Metabolism Gene Families AT1G01710 63.636 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1252 K01068 - gmx:100803260 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1252 5 24740135 24755634 Tpr5g1252 5 24740135 24755634 ECH
Tpr6g1996 6 21648148 21654605 Tpr5g1252 5 24740135 24755634 PCT