Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0845 ATGTCTCCACCAACCAAAACCACACCAAAACCCAACAACATTCATCCCCTCACTCCCACTCAAACAACCGAATCTCCTTCCCCTTCCCCCTCCGTCCCGCCGCGGCGCCGTAGTCTCCGTCTCGCTTCTATTTCCAACTCCGAGCCTCCTCAATCTCCAACAGTAACTACCCCCGAACCACCAACCGCTAGGGTTTCCGAACCGAAAATGCAGAAATCAAACCTAACCGCTTCGGAATCAGAACCTATTCTTAACTTGCGATCGGGAAAAAAAGTTCTCAAACGCGGAATCACTATCTCAAACGAAGATGAAGATTCTGAAAAGAATGATTCTAAAAGGAAGAAAAAAGTAGAAGAAAATCGAAGTGAAGTGAAGATTGATGAAGGTGAATCGAGTCGAAGGAGGATATTAACTAGAGAAGAGAAAGGAAAAGAAAAGGAAACTGTTGTTGTTGTTGATGAAAGAGTTGAATTCGGCGTGGAAGAGGTGAATGAAGAGTTGAATGTTCTAGAACAAGATGGAAACGCTGACAATAATGTTAGAGAGGAACGTGGTGTGAGGAGGAACATGGAAGGATTTCGTCGTATAGCTAGAGAAAACGCAACTCGTTTTGCGCGTTTTGCAGATGATGAAAACAATGGTGGTGATTTGTCTCCGGAAAATGAACAGGTGGAGAATGAGATTGAAGATTGGCCTGGTCCTTTTTCAACTGCTATGAAAATTATCAGGGATCGAGAAAAGAAAGGGATTGCATTTGGTTATGTGGCTACTCAAAGGAATTTGGTTGATTTGATAAAGTGGAAACCGAAATCGAATGAGGAGAAGTTAGGCGGGAAGTTAACGGTTCCGTCTTTGCAAGAACTTTCCATTCGGATACTTGCTAAGAATGTTGATGCCATTGTTTCGCTTGAGGGTGTGCCTGATGCTTTGAGGCATAGGCTTACTCAGTTGCTGTGTGATTCGAGAAAAATGAACAATCATTTCTTTGAACTTCTTGTTAGTGGAACTCCCACGGAGATTCGGGTTAGAGATTGCTCGTGGTTGTCTGAGGAACAATTTACCAAGTGCTTTCTAGCAAGTGATACTTCGAAGTTGGTGGTACTGCAACTTGACCAGTGTGGACGCTGTTTGCCGGATTTTGTGGTAACTTCCACTTTGGCAAGGTCACCAAAGCAGTTACCTTTGTTAACTAGTCTATCGCTTGGTGGTGGATGCCGGCTCTCAGATGAGGGGTTGCGTTCACTTGTTTCTTCTACTCCAATGCTTAGATCAATAAATCTTAGCCAGTGCTCCCTTCTCACATCTGCTAGTCTTTATACTTTGGCCGAATCATTAAAATCTCTTCTGAAAGAGTTGTACCTTGATCATTGCCTCGGCATTGATGCTGCACTGATTGTGCCAGCACTGATGGAGTTTGAGCATTTAGAAGTGTTGTCAGTGGCTGGCATCCCAACTGTTTGCGATACATTCGTCAAGGATTACATTGTTGCACGTGGTCACAACATGAAAGAGCTTATTCTGAAGGACTGTATAAACTTGACTGATGCATCAATCAAAGTCATTGCTGAAAACTGTCCTGGCATATGTGGGCTTGATCTTTCGAGCGTGTGCAAATTAACAGATTTATCCATGGGATATCTTACAAACGGTTGTCGTGCACTTCATACGCTGAAGCTTTGCCGTAACTCATTCAGTGATGAAGCAATTGCTGCATATGTGGAGACTAATGGAGAGTCCTTGATAGAACTATCACTTAATAACGTTAAAAAGGTTGGTTACCACACAACCTTGTCACTTGCAAGCCATGGAAAAAAATTGCATAGTCTAGATCTATCTTGGTGCCGAAATTTGAGCGACAATGCGTTGGGTTTGATAGTGGATAGTTGCCTGTCGCTGAGATTACTTAAACTCTTTGGATGCACTCAGGTAACAGATGTTTTTCTGAATGGCCACTCAAACTCGCAGATCCAGTTAATTGGTATAAAAATGACTTCTGTTTTGCAACATGTGAAAGTGCCGGATCCTAATCGAAGTACTTTGAATTATTCATCAGTCTCAGTAGAGCTGGCTCCTTAG 2076 0.4292 MSPPTKTTPKPNNIHPLTPTQTTESPSPSPSVPPRRRSLRLASISNSEPPQSPTVTTPEPPTARVSEPKMQKSNLTASESEPILNLRSGKKVLKRGITISNEDEDSEKNDSKRKKKVEENRSEVKIDEGESSRRRILTREEKGKEKETVVVVDERVEFGVEEVNEELNVLEQDGNADNNVREERGVRRNMEGFRRIARENATRFARFADDENNGGDLSPENEQVENEIEDWPGPFSTAMKIIRDREKKGIAFGYVATQRNLVDLIKWKPKSNEEKLGGKLTVPSLQELSIRILAKNVDAIVSLEGVPDALRHRLTQLLCDSRKMNNHFFELLVSGTPTEIRVRDCSWLSEEQFTKCFLASDTSKLVVLQLDQCGRCLPDFVVTSTLARSPKQLPLLTSLSLGGGCRLSDEGLRSLVSSTPMLRSINLSQCSLLTSASLYTLAESLKSLLKELYLDHCLGIDAALIVPALMEFEHLEVLSVAGIPTVCDTFVKDYIVARGHNMKELILKDCINLTDASIKVIAENCPGICGLDLSSVCKLTDLSMGYLTNGCRALHTLKLCRNSFSDEAIAAYVETNGESLIELSLNNVKKVGYHTTLSLASHGKKLHSLDLSWCRNLSDNALGLIVDSCLSLRLLKLFGCTQVTDVFLNGHSNSQIQLIGIKMTSVLQHVKVPDPNRSTLNYSSVSVELAP* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0845 691 MobiDBLite consensus disorder prediction 1 131 - -
Tpr5g0845 691 SMART LRR_CC_2 551 575 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 525 550 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 603 628 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 629 654 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 499 524 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 419 444 IPR006553 -
Tpr5g0845 691 SMART LRR_CC_2 393 418 IPR006553 -
Tpr5g0845 691 Gene3D Ribonuclease Inhibitor 493 575 IPR032675 -
Tpr5g0845 691 PANTHER F-BOX/LRR PROTEIN 137 684 - -
Tpr5g0845 691 MobiDBLite consensus disorder prediction 11 25 - -
Tpr5g0845 691 Gene3D Ribonuclease Inhibitor 576 674 IPR032675 -
Tpr5g0845 691 PANTHER UNCHARACTERIZED 137 684 - -
Tpr5g0845 691 MobiDBLite consensus disorder prediction 96 131 - -
Tpr5g0845 691 MobiDBLite consensus disorder prediction 67 83 - -
Tpr5g0845 691 SUPERFAMILY RNI-like 356 652 - -
Tpr5g0845 691 Gene3D Ribonuclease Inhibitor 274 489 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0845 Tpr-Chr5 15415450 15420787 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0845 K15082 - gmx:100808150 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3457 2 37953074 37956993 Tpr5g0845 5 15415450 15420787 PCT