Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3457 ATGGACCCACAAAATCAAGAAGATCAACAAGAACAACCTTCTTCTGTTCCTCCTCTGGAAGATGTAGCTGCTATCGCAGAACAACTAAAGGGTCATGGTTTTTTCGACAATCAAATTTCTATGCCATTGTCACCCAGAAATGAAACACCACCTGAACCCTTTCTCAAGAGAACAATTCAAGAAGATGACACTGATGATTATTACTTAGGTCGCTTACCAAAAGAAGCTTATGCCTCTTCTCCTAAACGCACTAAATTCTACAATTTTTTCGATGACCCAAAAGGCGAGAACCCGATCATTATCAGTGATACTGACAACGATGATGGTGATCAGAGGATGGAAATAACCGAAAATCAAATGCCGTTGGCTTTTGATATTAATGCCTATGACATTAATAATGAAAGTGATGATGATAACAATGATGATGAGACTCGGAGGAGAGAGTTAATTGAGGCTCAGAGGAGAGAGGCTGAGAGGAGAGAGTTAATTGAGGGTCAGAGAAGAGAGGCTCAGAGGAGAGAGTTAATTCGTCGTCAAAACATGCGTGAGCGGCAATATATAAAAGAAACTGCAAAGAGATATGCAGCACACATTCACCGTGTTCCTGAGAATAAAGATGGTGATCACAATGTGGCAATTGTTATTGATGATGGCTCTCCAAGTACTCCTTTCTCTGAAGCAATCAAAGCTATTCAAGAACGAGTTGAGAAAAACAGGAAAAAAGGGACTGTTGATGAATCCCTTATTTGGGTTCCTAAAAGGAATGGAGAAGATTTTGTTAATAGAAGATTTTTGGTTCCTTCGTTGGAAGATATGTCTCTTAAAGTTCTTGCTGAGCATGCTGATGCAGTGGTTTCGCTTGATGGTGTTTCTGATGAGCTAAAACTCAGGCTTAGCAATTTGCTATGTGATTCAAGAAGAATGAACGGTCATGTTCTTGAACTGCTTCTTAGAGGGAATCCGAAGGTGATTCGGCTTAAAGATTGTTCTTGGTTGACAGAGGAAGAATTTACAAAATATTTTGGAACGTTGAACCCTTCCGGAATAGAGGTGCTACATCTTAACCAATGTGGACGAGTTGTAGCTGAACATACATTACTTGCTACGGTGGCAAAGTCACCAAAATGCTTGTCAAAATTGATTAGTCTGTCCCTCACTGGTGCATGCCGTCTTTTTGATAACGGATTGCAGTTACTACTTTCTTCTGCTACTGCACTTAGATCCATAAATTTAAGCCAATGTTCCCTTCTCACTTTTGCCGGTCTTAATATTTTGGCTGATTCATTAGGATCAATTTTGAAAGAGTTGTATCTTGATGATTGCATATTGATTAATGCTACACTAGCTTTGCCAGCATTGAAGCGGCTTGAACAATTAGATGTGTTGTCACTGGCGGGACTTCCAACTGTTTCTGATAAATTTATCAACAGTTTCATCGTTGCACGTGGTCACAACATTAAGGAGCTTGTTTTAAAGGACTGCGTAGATTTAACTGATGCATCAATTAAAGTCATTGCGAATCATTGTCCTGGATTGCAAGCGCTTGATCTTATGAGCTTGTCCAAGTTGACGGATTTATCCATAGGTTATCTTACTAATAGTTGTCAAGCATTGCGTACATTGAAGCTTTGCCGCAATCCATTCAGCGATGAAGCAATTGGTGCATTTTTGGCGGTAACCGGCAAATCCTTGGAAGAACTTTCACTTAATAACATTAAGAAGGTTGGCCAACATACAGCCTTATCACTTGCAAAGGAGGCAAAAAATTTGCATACCTTAGATCTATCTTGGTGTCGAAATTTGACAGACAATGAGTTCGGTTTAATTGTGGATAATTGTTTCTCGCTGAGGTTTCTTAAACTTTTCGGTTGCTCACAGGTAACAGATGTTTTTCTCAAAGGGCACTCAAACTCGGAGCTTCGGATCATTGGGTTGAAGTTGTGTCCTTTATTGCAGCATATGGAACGACCTGATCCTCATCGAAGTGCTTTGCGATATGCACCAATCTCGCAGAAATGA 2019 0.4002 MDPQNQEDQQEQPSSVPPLEDVAAIAEQLKGHGFFDNQISMPLSPRNETPPEPFLKRTIQEDDTDDYYLGRLPKEAYASSPKRTKFYNFFDDPKGENPIIISDTDNDDGDQRMEITENQMPLAFDINAYDINNESDDDNNDDETRRRELIEAQRREAERRELIEGQRREAQRRELIRRQNMRERQYIKETAKRYAAHIHRVPENKDGDHNVAIVIDDGSPSTPFSEAIKAIQERVEKNRKKGTVDESLIWVPKRNGEDFVNRRFLVPSLEDMSLKVLAEHADAVVSLDGVSDELKLRLSNLLCDSRRMNGHVLELLLRGNPKVIRLKDCSWLTEEEFTKYFGTLNPSGIEVLHLNQCGRVVAEHTLLATVAKSPKCLSKLISLSLTGACRLFDNGLQLLLSSATALRSINLSQCSLLTFAGLNILADSLGSILKELYLDDCILINATLALPALKRLEQLDVLSLAGLPTVSDKFINSFIVARGHNIKELVLKDCVDLTDASIKVIANHCPGLQALDLMSLSKLTDLSIGYLTNSCQALRTLKLCRNPFSDEAIGAFLAVTGKSLEELSLNNIKKVGQHTALSLAKEAKNLHTLDLSWCRNLTDNEFGLIVDNCFSLRFLKLFGCSQVTDVFLKGHSNSELRIIGLKLCPLLQHMERPDPHRSALRYAPISQK* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3457 672 PANTHER F-BOX/LRR PROTEIN 133 666 - -
Tpr2g3457 672 Gene3D Ribonuclease Inhibitor 264 447 IPR032675 -
Tpr2g3457 672 Gene3D Ribonuclease Inhibitor 559 659 IPR032675 -
Tpr2g3457 672 Coils Coil 140 160 - -
Tpr2g3457 672 MobiDBLite consensus disorder prediction 1 21 - -
Tpr2g3457 672 SMART LRR_CC_2 535 559 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 587 612 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 509 534 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 483 508 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 561 586 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 403 428 IPR006553 -
Tpr2g3457 672 SMART LRR_CC_2 613 638 IPR006553 -
Tpr2g3457 672 MobiDBLite consensus disorder prediction 1 16 - -
Tpr2g3457 672 PANTHER UNCHARACTERIZED 133 666 - -
Tpr2g3457 672 Gene3D Ribonuclease Inhibitor 448 558 IPR032675 -
Tpr2g3457 672 SUPERFAMILY RNI-like 314 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3457 Tpr-Chr2 37953074 37956993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3457 K15082 - gmx:100798274 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3457 2 37953074 37956993 Tpr5g0845 5 15415450 15420787 PCT