Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0742 ATGATCAATATGGATGAAGCAGATTCAGTTTCAATTTCAGCATATGATGTGATGACAAGTTGGTTTACACCCTCTTGTATATTCTTAGTTGTCAACCTTGTTATTGGCACCATAGCTATTACCTCCCGTTTCGCCGCTCAACGAAAAGGGGACTCGCCACCGCAACTCGTCCGTTCCACGTCGTCGTTTCTTGGACGAGTCACGTCCTTCGGTCTCAGTTGTTGTAAATACAAACCAGCATGCTCAGCAACAACAACAATTCCATTAGAAACTCAGATCGAACCGATTGATAGTTGTGACGTGCCTCAGTTCGATCGGGCCGTACCATCTACCATGTTGGACCGAGTCAAGTCAAATGACATGGGCCTTTCTAAAACAGAAATTAATAAAGGCCCAGATGACTTGACCCGGAATCCTCTGCCTAGAGCTCCGTCGTTCTTGGAACGGTTGATGTCAGGGAATTTTCGTCGATTGGATTCGATAAAGGAGGAGAAGCAACCAAAATCCGAAGTGGAACTGGAATCTGAGGGGGAGGATGTGTTGAGAGAAAGGGTAGAAGAGGAAGAAGTGGATGCAAAGGCTGATGATTTTATAAAAAGGTTTAAGCAGCAACTAAGAATGGAAAGACTTGATTCCATTCTACGTTATAGGGATATACTTAATAGACACTGA 672 0.4405 MINMDEADSVSISAYDVMTSWFTPSCIFLVVNLVIGTIAITSRFAAQRKGDSPPQLVRSTSSFLGRVTSFGLSCCKYKPACSATTTIPLETQIEPIDSCDVPQFDRAVPSTMLDRVKSNDMGLSKTEINKGPDDLTRNPLPRAPSFLERLMSGNFRRLDSIKEEKQPKSEVELESEGEDVLRERVEEEEVDAKADDFIKRFKQQLRMERLDSILRYRDILNRH* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0742 223 Pfam Domain of unknown function (DUF4408) 13 44 IPR025520 -
Tpr5g0742 223 PANTHER DUF4408 DOMAIN PROTEIN 13 90 - -
Tpr5g0742 223 PANTHER DUF4408 DOMAIN PROTEIN 164 222 - -
Tpr5g0742 223 Pfam Cotton fibre expressed protein 187 222 IPR008480 -
Tpr5g0742 223 PANTHER COTTON FIBER (DUF761) 13 90 - -
Tpr5g0742 223 PANTHER COTTON FIBER (DUF761) 164 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0742 Tpr-Chr5 12723303 12724382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0742 - - mtr:MTR_2g039320 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3413 2 37620282 37621247 Tpr5g0742 5 12723303 12724382 PCT