Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3413 ATGGAAGACCCCATAGCAGCAGGTAGTAATAATAATTTCATAGCTATGGCTAATTGGTTTGCACCATCTCCTCTTTTCATCTTTGTAAACCTTGTCATCGGTACAATAGCTCTTGTTACTCGCTTCAATGCTAAACCACCCAAAAAACAATTCCAACAACAACTTTTCCAACGAGTCAAATCCTTTAATCTTAATCACTACAACCAAAACCAACCAAAATCTTCCGAGTCAGATCAATGCGAGTCCACTCAATCCCAACTCGTTCAAAAACAAAAACCGTCTCTGTTACAACGAGTCGTATCCTTCAAACTCAACAAACACGAACCAACTCAACCTAAAATAAAAACACATTACGCTCAAGCTGAATCCGAACATCCATGGATGAAACCGATTAAATTGAAACCGGCTAAATTGAAGCCGGTTTGTGATGAGGAGGAGGAGAATAGCAAGGTGGAGATGATGAAGAGATCAGCGAGTGAGAAAGAGTGTTCTATGACGTTTGACTGGGAGGAGGAAGAAGATGAAGAAATGGTTGAGAGAAGGAGGCCGGCGACGGCGATGGCGAGAAGTGAAACGACGATGTGTAAAGAAGATGAAGGTGTAGACTCAAAAGCTGATGATTTTATTAACATGTTTAAGAAACAATTGAGGTTGCAGAGGCTTGATTCTTTTATCCGCTACAGAAACACCTTGTGA 696 0.4095 MEDPIAAGSNNNFIAMANWFAPSPLFIFVNLVIGTIALVTRFNAKPPKKQFQQQLFQRVKSFNLNHYNQNQPKSSESDQCESTQSQLVQKQKPSLLQRVVSFKLNKHEPTQPKIKTHYAQAESEHPWMKPIKLKPAKLKPVCDEEEENSKVEMMKRSASEKECSMTFDWEEEEDEEMVERRRPATAMARSETTMCKEDEGVDSKADDFINMFKKQLRLQRLDSFIRYRNTL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3413 231 PANTHER DUF4408 DOMAIN PROTEIN 90 231 - -
Tpr2g3413 231 PANTHER DUF4408 DOMAIN PROTEIN 15 79 - -
Tpr2g3413 231 PANTHER COTTON FIBER (DUF761) 15 79 - -
Tpr2g3413 231 PANTHER COTTON FIBER (DUF761) 90 231 - -
Tpr2g3413 231 MobiDBLite consensus disorder prediction 162 200 - -
Tpr2g3413 231 Pfam Domain of unknown function (DUF4408) 16 41 IPR025520 -
Tpr2g3413 231 MobiDBLite consensus disorder prediction 70 92 - -
Tpr2g3413 231 Pfam Cotton fibre expressed protein 198 231 IPR008480 -
Tpr2g3413 231 MobiDBLite consensus disorder prediction 176 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3413 Tpr-Chr2 37620282 37621247 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3413 - - mtr:MTR_4g126170 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3413 2 37620282 37621247 Tpr5g0742 5 12723303 12724382 PCT