Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0733 ATGGAGAGTTTAACAAAAGTATTAGTGTTTTTGTGTTTATGTGTTTGTTATGTCACAAGTTCTGTGACTTATGATCATAAAGCTATTGTGATTAATGGTAAGAGAAGAATTTTGATCTCTGGTTCCATCCACTATCCAAGAAGTACTCCTCAGATGTGGCCGGATTTAATTCGAAAGGCCAAAGATGGAGGTGTAGATGTCATTGAAACTTATGTATTTTGGAATGGACATGAACCTTCTCCAGGAAAATATTACTTTGAAGATAGATTTGATTTGGTGAAGTTTATCAAAGTGGTTCAACAAGCAGGACTATATGTTCATTTACGTATTGGTCCTTATGTTTGTGCAGAATGGAATTTTGGAGGATTCCCTGTTTGGCTAAAGTATGTTCCAGGTGTTGCTTTCAGAACAGACAATGAACCGTTCAAGGTGGCTATGCAAAAATTCACTGCTAAGATTGTTAGTCTTATGAAATCAGAGAGTTTGTTTCAAAACCAAGGTGGTCCAATCATTTTGTCTCAGATTGAGAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCTCCTGGAAAAGCTTACACCAAATGGTTTTCTCAAATGGCTGTAGGATTAGATACCGGTGTACCGTGGATCATGTGTAAGCAAGAAGATGCTCCTGATCCTATTATTGATACGTGCAATGGATATTACTGTGAAAACTTCTTTCCCAACAAGAACTACAAACCGAAAATGTGGACTGAAAATTGGTCCGGCTGGTACACTGATTTCGGTAGTGCTGTCCCTTATAGACCAGCAGAAGACTTAGCATTCTCAGTTGCTAGATTCATTCAAAATCGCGGCTCATATGTTAACTACTATATGTACCATGGAGGAACTAATTTTGGAAGGACATCTAGTGGCCTTTTCATTGCCACGAGTTACGACTATGATGCTCCTCTTGACGAATACGGACTTACAAATGAACCAAAATATACACATCTAAGAGATTTACATAAAGCAATAAAGCAATGCGAGTCAGCTTTAGTGTCCGTGGATCCGACGGTGTCATGGCCTGGAAAAAACCTTGAGGTACACGTTTACAAGACAAGCTTTGGTGCCTGTGCTGCATTTCTTGCAAATTACAACACCGGAACATGGGGAAAAGTTCCATTTGGAAATGGCCAATACGACCTACCGCCTTGGTCTATCAGTATTCTTCCTGATTGCAAAACTGAGGTTTATAACACCGCAAAGGTTCGCGCACCAAGGTTTCATAGAAAGATGACTGCAGTGAGCTCATTTACTTGGCAGTCGTACAACGAACAACCTGCCGCCTCTGGTGGAAGTGATTCCTTCACAGCAAATTCACTTTTGGAGCAAGTCAATGTGACTCGTGATTCGTCAGATTATTTGTGGTATATGACAGATGTCAACATTAGTCCTAATGAAGCTTTTTTAAAGAATGGTCAATCTCCTGTTCTTACTGCAATGTCGGCCGGCCATGTTCTACATGTTTTTGTTAATGGTCAATATTCAGGCACTGCATATGGATCATTGGAGAATCCTAAATTAACATTTAGTGGTAATGTGAAGATGTGGGTTGGCAATAACAAGATTTCTCTACTTAGTGTTGCCGTTGGTCTCTCGAATGTTGGCATCCACTATGAAACATGGAATGTTGGCGTGTTAGGCCCGGTAACATTGAAAGGTTTAAACGAGGGGACAAGAGACTTGTCTCGACAAAAATGGTCTTACAAGACTGGACTGAAAGGTGAAGCCTTGAACCTTAATACCGTATCCGGAAGTTCTGCTGTTAGCTGGGCACAAGGGCCATCATTGTCTAAAAAACAACCTTTGACATGGTACAAGACAACTTTCAGCGCGCCGGCCGGTAATGATCCATTGGCTCTAGATGTGGGTAGCATGGGAAAGGGTGAAATATGGGTAAATGGTCATAGCATTGGTCGTCATTGGCCTGCATATATAGCACGCGGTAATTGTGGTGGTTGTAATTATGCCGGAACATTTACCGATAAAAAATGCCGAACAAATTGTGGACAGTCTACCCAAAAATGGTATCATATTCCTCGCTCGTGGCTGAACCCAAGTGGAAACTTCTTGGCTGTGTTGGAAGAATGGGGAGGCGACCCTACCGGAATTTCATTGGTGAAAAGAACATAA 2160 0.413 MESLTKVLVFLCLCVCYVTSSVTYDHKAIVINGKRRILISGSIHYPRSTPQMWPDLIRKAKDGGVDVIETYVFWNGHEPSPGKYYFEDRFDLVKFIKVVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGVAFRTDNEPFKVAMQKFTAKIVSLMKSESLFQNQGGPIILSQIENEYGPVEWEIGAPGKAYTKWFSQMAVGLDTGVPWIMCKQEDAPDPIIDTCNGYYCENFFPNKNYKPKMWTENWSGWYTDFGSAVPYRPAEDLAFSVARFIQNRGSYVNYYMYHGGTNFGRTSSGLFIATSYDYDAPLDEYGLTNEPKYTHLRDLHKAIKQCESALVSVDPTVSWPGKNLEVHVYKTSFGACAAFLANYNTGTWGKVPFGNGQYDLPPWSISILPDCKTEVYNTAKVRAPRFHRKMTAVSSFTWQSYNEQPAASGGSDSFTANSLLEQVNVTRDSSDYLWYMTDVNISPNEAFLKNGQSPVLTAMSAGHVLHVFVNGQYSGTAYGSLENPKLTFSGNVKMWVGNNKISLLSVAVGLSNVGIHYETWNVGVLGPVTLKGLNEGTRDLSRQKWSYKTGLKGEALNLNTVSGSSAVSWAQGPSLSKKQPLTWYKTTFSAPAGNDPLALDVGSMGKGEIWVNGHSIGRHWPAYIARGNCGGCNYAGTFTDKKCRTNCGQSTQKWYHIPRSWLNPSGNFLAVLEEWGGDPTGISLVKRT* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0733 719 Gene3D - 580 719 - -
Tpr5g0733 719 SUPERFAMILY (Trans)glycosidases 21 338 IPR017853 -
Tpr5g0733 719 Pfam Beta-sandwich domain in beta galactosidase 341 412 IPR041392 -
Tpr5g0733 719 SUPERFAMILY Galactose-binding domain-like 575 715 IPR008979 -
Tpr5g0733 719 Pfam Glycosyl hydrolases family 35 29 333 IPR031330 -
Tpr5g0733 719 Gene3D Glycosidases 15 337 - -
Tpr5g0733 719 Gene3D - 442 573 - -
Tpr5g0733 719 SUPERFAMILY Galactose-binding domain-like 396 565 IPR008979 -
Tpr5g0733 719 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 167 179 IPR019801 GO:0004553|GO:0005975
Tpr5g0733 719 PANTHER BETA-GALACTOSIDASE 5 719 - -
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 32 49 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 53 71 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 108 127 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 165 180 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 244 259 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 301 317 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 610 624 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PRINTS Glycosyl hydrolase family 35 signature 637 653 IPR001944 GO:0004553|GO:0005975
Tpr5g0733 719 PANTHER BETA-GALACTOSIDASE RELATED 5 719 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0733 Tpr-Chr5 12389653 12395064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0733 7 719 Glycoside Hydrolase AT3G52840 67.737 0.0 1062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0733 - - gmx:100810170 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3408 2 37575163 37581790 Tpr5g0733 5 12389653 12395064 PCT