Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0718 ATGATCAAAGGTAAAGATGTATACAATATTCTTGAGAGTATCATGCCCCTATATGTGGCCATGTTATTAGGGTATGGATCAATTAAATGGTGGAAAATGTTCACACCTGACCAATGTATTGGTATAAACCGTTTTGTAGCAATGTTTGCAGTTCCTACACTTACTTTTATTTACATATCTCCAATTAATCCTTATCATATGAATTGGAGATTTATAGTTGCTGACATACTTCAAAAAATTGTGACATTAATTTGTCTATTTTTATGGAACATTTTCACAAAACGTGATGGTTTTGATTGGTCAATAACAATTTTTTCACTTATTAATTTGCCAAACACACTTGTTGTAGGAATTCCTCTTTTGAATGCTATGTATGGAGAATTTACCGTATCACTTTTGATCCAAATTTTGGTCATGCAAAGTGTTTTATGGTATAATGTTGTATTGTTAATGTATGAATATAGAGCTGCTAAGCTTTTTATTTCTCAACAATTTGTTGAGACTAATGAAGGGTCACAAAAGGTTGAAAATGAAATTGAATCAAATGTTGATGTAGAATTGGGAGAAATTGGTAATAATGGTGTCAAGTTATCTCATTCAACATCTAAAGTGTCAAATCTTACTAGGGTTGATGCCTTTTCAAGCTACACAAATAGTCCTCAAAATAATGATTTTGAAGAAATGTTAGATATATGGAAAAAATTTCAGAAGAGTAGGAGTTGCACTAGTATTGGTGGTGTGAAGATTTCTCCTTACCCAAATTTAAAATCAAATTCAGAAAAAATCATTGGCAAAACAAAGATAAATTTTAGTGGTCGCTTTGGCACGCCACAAGAAATTGAAGCATCAAAAGGTGTTAATGAATTGGTTGACAAGAATTCTAGTGCAAAAGTAATTGAATTGGAAGAGCATGAGAATGAGGAGATGCATGAAGAAGGAAATGTAGACAATGAACAACAAATGCTACCTAGTCATGACATGATGACAAAGCTCATTCTTGTTAGGGTATGGAGGAAAATGTTAAAAAATCCTAATCTCTATGCTGCAGTTCTTGCCATTGTTTGGGCTTTCATAGCATCAAGGTTGGACATCAAAATGCCATCAATCATACATGATTCTATTACAATAATTTCTCACACTGGACTAGGAATGTCCATGTTTAGTCTAGGCATATTCATGGCATTACAACCCAAAATCATTGCTTGTGGAAAAACTTCAGTAACAATGTCTACGGTACTTAGATTCTTGGTTGGTCCATTATTGTTTGCTGCAACATCTGCATCTCTTGGTATTCGTGGAGTTGTTTTTAAAGTAGGAATTATTCAGGCTGCTCTTCCACAAGGTATTGTTCCCTTTGTTTTCGCCAAAGAGTACAATCTCCACGCTGAAATATTTAATGCAGCGGTTTCTCTTGGATTGGCACTTGCATTCCCTATAACAATACTCTACTATGTGATTCTTGGTGCTTGA 1470 0.3401 MIKGKDVYNILESIMPLYVAMLLGYGSIKWWKMFTPDQCIGINRFVAMFAVPTLTFIYISPINPYHMNWRFIVADILQKIVTLICLFLWNIFTKRDGFDWSITIFSLINLPNTLVVGIPLLNAMYGEFTVSLLIQILVMQSVLWYNVVLLMYEYRAAKLFISQQFVETNEGSQKVENEIESNVDVELGEIGNNGVKLSHSTSKVSNLTRVDAFSSYTNSPQNNDFEEMLDIWKKFQKSRSCTSIGGVKISPYPNLKSNSEKIIGKTKINFSGRFGTPQEIEASKGVNELVDKNSSAKVIELEEHENEEMHEEGNVDNEQQMLPSHDMMTKLILVRVWRKMLKNPNLYAAVLAIVWAFIASRLDIKMPSIIHDSITIISHTGLGMSMFSLGIFMALQPKIIACGKTSVTMSTVLRFLVGPLLFAATSASLGIRGVVFKVGIIQAALPQGIVPFVFAKEYNLHAEIFNAAVSLGLALAFPITILYYVILGA* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0718 489 Pfam Membrane transport protein 10 484 IPR004776 GO:0016021|GO:0055085
Tpr5g0718 489 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 207 - -
Tpr5g0718 489 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 294 488 - -
Tpr5g0718 489 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 294 488 IPR033526 GO:0010315|GO:0010329
Tpr5g0718 489 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 207 IPR033526 GO:0010315|GO:0010329
Tpr5g0718 489 TIGRFAM 2a69: auxin efflux carrier 1 488 IPR014024 -
Tpr5g0718 489 Coils Coil 301 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0718 Tpr-Chr5 12054232 12057828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0718 1 488 Organic Solute Cotransporters AT1G23080 38.149 5.52e-135 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0718 K13947 - gmx:100788935 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3391 2 37390519 37393623 Tpr5g0718 5 12054232 12057828 PCT