Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3391 ATGATTACCGGTAAGGATATATACGATGTTTTCGCGGCTATTGTACCGTTATATGTTGCTATGATATTAGCATATGGTTCGGTTCGATGGTGGAAAATCTTCACACCAGATCAATGTTCTGGTATAAACCGTTTTGTCGCGGTTTTTGCAGTTCCATTACTATCTTTCCATTTTATCTCTTCCAATGATCCTTATGCTATGAATTATCATTTCTTAGCAGCTGATTCACTTCAAAAAGTAGTTATTCTTGGTGCTCTTTTTCTATGGAACACATTCACAAAAAACCAAGATAGTCTTGATTGGACTATTACACTTTTCTCCCTTTCAACTCTTCCTAACACACTTGTTATGGGAATTCCTCTTTTAAAAGCTATGTATGGTGATTTCTCAGGAAATCTCATGGTACAAATTGTTGTTCTACAAAGTGTTATTTGGTACACTCTTATGTTGTTTTTGTTTGAATATAGAGCTGCTAAACTTCTTATAACAGAACAGTTTCCTGAAACTGCAGCTTCTATAACATCATTCAAAGTTGATTCTGATGTTGTTTCGCTTAACGGTCGAGAACCACTTCAAACTGATGCTGAAATAGGTGAAGATGGTAAACTTCATGTTGTTGTTAAAAGATCAACTACTAACTCTATGGTATCTGGATCATTCAATAAATCTCATTTAAACAATATGACACCACGCGCTTCGAATCTTACCGGTGTTGAGATATATTCGGTTCAATCATCAAGAGAACCAACACCAAGAGCTTCTAGTTTTAACCAAACTGATTTTTATGCCATGTTTCAAAGTAAAGCGCCGAGTCCGAAACATGGTTATACAAATAGTTTTCAAAGTAATAATGGTATTGGTAGTGATGTTTATTCTATGCAATCTTCGAAAGGGGTAACGCCAAGGACTTCGAATTTCGAAGATGAGACGTTGAAGATGCATAAAAAGAGAGGAGGGAGAAGTATGAGTGGTGAGTTGTTTAATAATGGTGGTTCTTATCCTCCTCCAAATCCAATAATTTCAGGTTCTACAAGTGCTGGTACAAAGAAGAAAGATAGTGTTGGTGGTGGAAGTGGTAATGGACCTAATAACAAAGAGTTACACATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGAAGGGAATCTTAAACATGCAGTTAATAGAGCTGCTTCTACTGATTTTGGCACTGTTGATCCTTCCAAATCTGTTCCACATGATCAAACTATTCTTGCATCAAAAGGTGTTAATGAATTGATTGCGAACATGAGTCCTGGCCGGAGAGAAAGGGATATGGAAATCGAGGAAGGAACAAAGTCTCCATATATTAGCCAGAAGAAGATGGATTTGGAAGGAGGGGATGTAAACAAAAACACACAGATGCCACCAGCAAGTGTGATGACAAGACTCATTCTCATCATGGTTTGGAGGAAACTCATCAGAAATCCAAATACCTACTCAAGTCTTATAGGACTTATTTGGTCTCTTATATCATTTAGGTGGCACATTGAAATGCCCTCGATTGTAAAAGGTTCAATCTCAATACTATCTGATGCTGGTCTTGGAATGGCCATGTTCAGTCTTGGTTTGTTCATGGCATTACAGCCTAAGCTGATTGCATGTGGAAAACGAGTTGCGACATTTTCTATGGCTGTTAGGTTCTTGACTGGTCCTGCTGTGATTGCAGCTACCTCAATCGCAATTGGTATCCGTGGAGTTCTCTTACATGTTGCAATTGTTCAGGCTGCCCTTCCCCAAGGTATTGTTCCCTTTGTGTTTGCCAAAGAATACAATCTCCATCCAGATATACTTAGTACTGCGGTTATATTTGGAATGTTGATTGCATTGCCTATAACAATACTCTACTATGTGCTTCTTGGAGTATAG 1890 0.381 MITGKDIYDVFAAIVPLYVAMILAYGSVRWWKIFTPDQCSGINRFVAVFAVPLLSFHFISSNDPYAMNYHFLAADSLQKVVILGALFLWNTFTKNQDSLDWTITLFSLSTLPNTLVMGIPLLKAMYGDFSGNLMVQIVVLQSVIWYTLMLFLFEYRAAKLLITEQFPETAASITSFKVDSDVVSLNGREPLQTDAEIGEDGKLHVVVKRSTTNSMVSGSFNKSHLNNMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFQSKAPSPKHGYTNSFQSNNGIGSDVYSMQSSKGVTPRTSNFEDETLKMHKKRGGRSMSGELFNNGGSYPPPNPIISGSTSAGTKKKDSVGGGSGNGPNNKELHMFVWSSSASPVSEGNLKHAVNRAASTDFGTVDPSKSVPHDQTILASKGVNELIANMSPGRRERDMEIEEGTKSPYISQKKMDLEGGDVNKNTQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLISFRWHIEMPSIVKGSISILSDAGLGMAMFSLGLFMALQPKLIACGKRVATFSMAVRFLTGPAVIAATSIAIGIRGVLLHVAIVQAALPQGIVPFVFAKEYNLHPDILSTAVIFGMLIALPITILYYVLLGV* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3391 629 MobiDBLite consensus disorder prediction 339 364 - -
Tpr2g3391 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 629 IPR033526 GO:0010315|GO:0010329
Tpr2g3391 629 Pfam Membrane transport protein 10 624 IPR004776 GO:0016021|GO:0055085
Tpr2g3391 629 TIGRFAM 2a69: auxin efflux carrier 1 628 IPR014024 -
Tpr2g3391 629 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3391 Tpr-Chr2 37390519 37393623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3391 103 629 Organic Solute Cotransporters AT5G57090 74.135 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3391 K13947 - gmx:100305383 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3391 2 37390519 37393623 Tpr2g3391 2 37390519 37393623 ECH
Tpr2g3391 2 37390519 37393623 Tpr5g0718 5 12054232 12057828 PCT