Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0703 ATGGGAACATTTACAAGCTTTAGAAAAGCCTATGGAGCTCTCAAGGACTCCACCAAGGTTGGCCTTGCCAAAGTCAATAGTGAATACAAGGAGTTGGATATTGCCATTGTGAAAGCTACCAATCATGTTGAATATCCTCCAAAGGAACGCCATGTTAGAAAAATTTTCTATGCAACATCAGCACACCAACCACGCGCGGACGTGGCATATTGCATTCATAAACTTTCCAAGAGACTTGCAAAGACACGAAGTTGGATAGTTGCTATAAAGACATTGATAGTGATTCATAGGACTTTGAGAGAAGGCGATCCTACTTTTCGAGAAGAGCTTGTGAACTACGCGCGCAGGGGACATATTCTCCAAATATCTAATTTCAAAGATGACTCAAGCCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTACGCACTATTTTTAGAAGAAAGACTCGAATGTTTTAGAGTCCTTAAATATGACATTGAATCCGAGCGTTTAGTAAAATCATCGCCAGCTGCAACTAAAGCACATAGTAGAACTCGATCATTGGCTAATGACGATCTCTTGGAGCAACTACCTGCTTTGCAACAACTTTTATTTCGTCTTATTGCTTGTCAGCCAGAGGGATGTGCTTATACCAATTATCTAGTACAATATGCATTGGCTTTGGTATTGAAAGAAAGCTTCAAAATATATTGTGCACTCAATGATGGAATCATTAATCTTGTGGACATGTTTTTTGAAACTTCAAGACATGAAGCAGTGAAGGCTTTAAATGTATATAAACGAGCCGGCCAACAGGCTGAAAATCTTGCCGAATTTTATGAATACTGCAAAGGCTTGGACCTTGCTAAGAATTTTCAGTTTCCAACCCTAAGACAGCCACCTCCATCTTTTCTTGCCACAATGGAAGAATATATCAAAGAAGCACCTCAATCAGGATCTATGCATAAGAGATTGGAGTATGAGCAAAATGATGAATCTCCTGAGGAAGAACCGGAGCCAAAAGAACCCGAAGAGCCACAAGAAACCGAGAAACAAGAAGAGGAAGTCAAAGAGGAAGAAGAATCACCTGAGGAAGAAACACAGCCTAGCGAAGAAGAAGTTGAGCCTCCTCCACTTATATCAACTGACAACGGTACCGATGACTTGCTGGGTCTGAGTGAAATAAATCCTAGAGCTATAGAGTTGGAGGAAAACAATGCCATGGCTCTTGCAATCATACCGCCCGGTGGAAATAATAATTCAAACAATCTTGCTTTGAGTAACATTGGTGGAACCACTGGTTGGGAACTCGCATTGGTTACGACACCAAGTAACCATACCAGTCAAGCACCGGATCGCAGAATGGCCGGCGGTTTTGACAAACTATTACTAGACAGCTTATACGAAGATGAAAGCGCGCGGAGACAACTTCAACTTCAAAATGCAGGCTATGGACATGAAGAAATAACTGTACAAAATCCATTTGATCATTATAATCAACATGATCCATTTGCAATGTCTAAGAACATAGCACCTCCAACAAATGTTCAATTGGCATTGTTGAATCAACAACAACAGCAACATCAAATGATGTTCCAACAACAACAAATGATGTATCCACAACAACAACAACAACAACAAAATTATAACATGGCTATGGTTCCTCATCAGCAACAACCTCATTCTCAACAATTGCAAATTATGGGAAATCATAATCCATTTGGTGATCCTTTACCTGTGGCTAGTTATCCTCATAACTCCTTGCCTCCACAAGGAAATTACAATTTAATGTAG 1779 0.4042 MGTFTSFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHKLSKRLAKTRSWIVAIKTLIVIHRTLREGDPTFREELVNYARRGHILQISNFKDDSSPQAWDCSAWVRTYALFLEERLECFRVLKYDIESERLVKSSPAATKAHSRTRSLANDDLLEQLPALQQLLFRLIACQPEGCAYTNYLVQYALALVLKESFKIYCALNDGIINLVDMFFETSRHEAVKALNVYKRAGQQAENLAEFYEYCKGLDLAKNFQFPTLRQPPPSFLATMEEYIKEAPQSGSMHKRLEYEQNDESPEEEPEPKEPEEPQETEKQEEEVKEEEESPEEETQPSEEEVEPPPLISTDNGTDDLLGLSEINPRAIELEENNAMALAIIPPGGNNNSNNLALSNIGGTTGWELALVTTPSNHTSQAPDRRMAGGFDKLLLDSLYEDESARRQLQLQNAGYGHEEITVQNPFDHYNQHDPFAMSKNIAPPTNVQLALLNQQQQQHQMMFQQQQMMYPQQQQQQQNYNMAMVPHQQQPHSQQLQIMGNHNPFGDPLPVASYPHNSLPPQGNYNLM* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0703 592 MobiDBLite consensus disorder prediction 326 367 - -
Tpr5g0703 592 MobiDBLite consensus disorder prediction 310 383 - -
Tpr5g0703 592 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 576 - -
Tpr5g0703 592 SUPERFAMILY GAT-like domain 178 309 - -
Tpr5g0703 592 SMART enth_2 30 161 IPR013809 -
Tpr5g0703 592 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Tpr5g0703 592 MobiDBLite consensus disorder prediction 311 325 - -
Tpr5g0703 592 Gene3D ANTH domain 173 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tpr5g0703 592 Gene3D - 5 161 IPR008942 -
Tpr5g0703 592 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 576 IPR045192 GO:0048268|GO:0072583
Tpr5g0703 592 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Tpr5g0703 592 CDD ANTH_N 32 154 - -
Tpr5g0703 592 Pfam ANTH domain 31 309 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0703 Tpr-Chr5 11785158 11790540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0703 K20044 - gmx:100786060 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3374 2 37258492 37262496 Tpr5g0703 5 11785158 11790540 PCT