Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3374 ATGGGAACGTTCCAAACATTTAGAAAGGCCTACGGAGCGCTTAAAGATTCCACCAAGGTTGGCCTAGCCAAGGTCAATAGCGATTACAAGGAATTGGACATTGCAATTATTAAAGCTACAAGTCACGTAGAATATCCCCCCAAAGAACGTCATGTTCGAAAAATATTCTATGCCACATCTGCACACCAACCACGGGCAGATGTAGCATATTGTATCCACACACTTTCGAAGAGACTTTCCAAGACGCGGAATTGGATAGTTGCCATAAAGACATTGATAGTGATTCATAGGATATTGAGAGAGGGTGATCCTACCTTCAAAGAAGACCTTGTAACCTACTCGCGCAGGGTCCGTTTTCTGCAAATTCCCAATTTCAGAGATGACTCCAGCCCTCTAGCTTGGGATTGTTCTGCATGGGTTCGAAACTATGCACAATTTTTAGAAGAAAGGCTTGAATGTTTTAGAATTCTTAAATATGACATTGATCTCGAGCATTTAACAAAATCATCGCCGAATTCAACAAAGGCACGTAGCAAAACAGGAATGTTGACCAGTGATGAGCTGTTGGAGCAGCTTCCGGCACTGCAGCAACTTCTTTACCGACTTATTTGCTGTCAGCCTGAAGGATCAGCTTTCAGCAATTATCTAATACAGTATGCATTGGCCTTGATTCTGAAAGAGAGTTTCAAAATATACTGTGCCCTCAATGATGGAATCATAAAACTTGTGGAAGTGTTCTTTGATATGGCAAGATATGACGCGGTAAAGGCTATGCATATTTATAAAAGAGCTGGCCAACAGGCTGAAAATCTTGCTAATTTCTATGAATACTGCAAAGGCTTAGACCTTGCTAGGAATTTTCAATTTCCAATTCTGAGACAGCCACCACCTACTTTTATTGCCACAATGGAAGAATACATTAAAGAAGCACCTTCATCAGGCAATGCTAAGAGACTGGAGAGTAAGAAAATTGATCAATCACCAAAAGAAGAACCAGAACAAAAAGAAACTGAAAAGCCTGAGGTAATTGAGGAGCAAGTTGAAGAAGTCAAGGAGGAAGAACCAGTTGAGAAGGATCAGAGTCATCAGACAGAAGAGGCTGAACTTCCTCCTTTGATATCAACCGACGGTGATGATGATTTGCTGGGTCTAAACGAAATAAATCCGAAAGCTCAAGAACTAGAGGATAGCAATGCTTTGGCACTGGCAATTGTACCACTTGGTGGAAACAATTCGAACAATCTTGCTTTGACTGACATAAGTGGAACTACTGGTTGGGAACTTGCACTCGTGACGACACCAAGCAACCACATAAGCCAAGCACCAGATCGAAAAATGGCTGGTGGATTTGACAAGTTATTGCTAGACAGTTTGTATGAAGATGAAAATGCCAGGAGACAACTTCAACTCCAAAATGCTGGTTATGGATATGGCCGAACAGCTATACATAATCCGTTCGATAATTATCATCAGCAAGATCCATTTGCAGTATCGAACAGCTTAGCGCCTCCATCTAATGTACAAATGGCATTAATGGCTCAACAACAAATGATGTTCCAACAACAGCAACAACAGCAAATGATGTTCCAACAACACAACATGATGATGGTACCTTACCAGCAACAGCATCCACATACTCAGTACCCTCAACAGATGTCAGTGGGTTATTCTAATCCATTTGAAGATCCTTTACCTGTACCTAGCTATTCTTATAATTCACTGCACCATCATCAAGGGAACTACAATATAATGTAG 1755 0.4108 MGTFQTFRKAYGALKDSTKVGLAKVNSDYKELDIAIIKATSHVEYPPKERHVRKIFYATSAHQPRADVAYCIHTLSKRLSKTRNWIVAIKTLIVIHRILREGDPTFKEDLVTYSRRVRFLQIPNFRDDSSPLAWDCSAWVRNYAQFLEERLECFRILKYDIDLEHLTKSSPNSTKARSKTGMLTSDELLEQLPALQQLLYRLICCQPEGSAFSNYLIQYALALILKESFKIYCALNDGIIKLVEVFFDMARYDAVKAMHIYKRAGQQAENLANFYEYCKGLDLARNFQFPILRQPPPTFIATMEEYIKEAPSSGNAKRLESKKIDQSPKEEPEQKETEKPEVIEEQVEEVKEEEPVEKDQSHQTEEAELPPLISTDGDDDLLGLNEINPKAQELEDSNALALAIVPLGGNNSNNLALTDISGTTGWELALVTTPSNHISQAPDRKMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGRTAIHNPFDNYHQQDPFAVSNSLAPPSNVQMALMAQQQMMFQQQQQQQMMFQQHNMMMVPYQQQHPHTQYPQQMSVGYSNPFEDPLPVPSYSYNSLHHHQGNYNIM* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3374 584 Gene3D ANTH domain 173 322 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tpr2g3374 584 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Tpr2g3374 584 MobiDBLite consensus disorder prediction 311 374 - -
Tpr2g3374 584 MobiDBLite consensus disorder prediction 315 346 - -
Tpr2g3374 584 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 570 IPR045192 GO:0048268|GO:0072583
Tpr2g3374 584 SMART enth_2 30 161 IPR013809 -
Tpr2g3374 584 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Tpr2g3374 584 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 570 - -
Tpr2g3374 584 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Tpr2g3374 584 SUPERFAMILY GAT-like domain 180 309 - -
Tpr2g3374 584 CDD ANTH_N 32 154 - -
Tpr2g3374 584 Gene3D - 5 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3374 Tpr-Chr2 37258492 37262496 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3374 K20044 - gmx:100815975 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3374 2 37258492 37262496 Tpr2g3374 2 37258492 37262496 ECH
Tpr2g3374 2 37258492 37262496 Tpr5g0703 5 11785158 11790540 PCT