Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0700 ATGCATCGAGCTGTTGTGGATCCATTGTTGTCGCCAATTTTGAGTTCGGACTCTGTTTCTCGTAGATCGGAGCCGGAAAAAGGGAGATTTGGTGATCTTAGAGGGTTGCAGTGGCGTATAAATCTTGGGGTTTTACCTTCTTCTTCTGCAGCTTCCATTGATGATCTTCGTCGAGTTACTGCTGATTGTAGAAGAAGGTATGCCAGGTTGAGAAGGCACCTCCTTGTTGAACCACCTGTTCCAAAGAATGGAACCAATTCATCGAATCTTGAAATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCAGAGCTCGAGAGATTGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGTTATTTCCAAACACCAGGATGCCAAGGCATGTTGAGACGCATTTTATTGCTATGGTGTCTCAAGAACCCAGAATGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTCTACTTTATGTTCTCCAAGTTGATTTGGAGCGTCTCTCAGAAGTTCGGAAGCTTTATGAGGATCACTTTACAGACAAATTTGATGGTCTTTTATGTCAAGAGAATGATCTTACTTACAGCTTTGATTTTAGGAAATCTCCTGACATGACGGAGGATGAAATTGGCTCCCACGGAAATGCAATGAAAGCCAATAGTATTGACGAACTTGAACCTGAGATTCAGTCCATTGTATTACTAAGTGATGCATATGGAGCTGAAGGTGAACTCGGCATCGTGTTATCAGAGAAATTCATGGAACATGACGCATACTGTATGTTTGATGCTTTAATGAAGGGGGCCAATGGTTCAGTTGCAATGGCCGATTTCTTTTCTTCCTCTCCTGTAGCTGGCTCCCATACTGGCTTGCCTCCTGTGATTGAAGCTTCTATGGCATTGTATCATTTGTTATCTCTTGCTGATTCTTCTCTTCATAGCCATCTTTTGGACCTTGGAGTTGAACCGCAGTACTTTTATCTTCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGACAGACTATTAATCATTTGGGATGAGATCTTTGCATCAGATAACAGCAAAGTGGAAAATAGTGCTGATGACAACATAGATTACGGGTTCAGGATCTTACAATCACCTCGTGGAGCATTTATATCGGCTATTGCTGTAGCAATGTTACTTTATTTAAGATCATCTCTACTTGCAACTGAAAACCCTACAACCTGTCTCCAAAGACTACTAAACTTCCCCGAAAACATTACCATCGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGATCTTGCTTTAAGTATTGATATTTCGTCCTCATCGCTTTTGCTTGTAGAGTCTCATTACCAAAGTAAAATGACGTCTACGAGATCCACGGTCCTTCCATCTGAATCTGTGTCTCCAAAAACTCCTCTGAATTTCGTACCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCTCAAAAGGCCGAAGAACGTAAGAAAGATGTTGTAGAAAATCAGATTCCAACTCGGAAGAAAGGATGGACAGAAAAGATTAAAATACGTTTGCGAAGAACGGAATCTGACCCGCCTCCATCAAGGGTTCTAAGCGGACAAAGGGGATCTAAGCCATCGTTTAGGCGCAGTTTGTTAGAAGATCTGCGTAAAGCACTTGGCGCTGAGGAAAACACAGAACATGAGCAGCGTCATGATGAAATCTTAAGCGAGCAGGATAATATTTCTGAAGCAGTTGAAATAGAACAACAAGATAGTGGCTGTAACAGCGACAACAATTCTGATGATAAATGTCCAAGTGGAAATTCTGGACATGAGGAAGATTCGTCTATCTATTCCGACTCCACTAGTCCTCCTAATGAGGCCAATGATCATGAAATCGCCTCAGAAAAAAATAGTGCTACATCTTATTTATCCCTAGATGAATGTAATGAAATTTTAGAAACTAGTCCTATTGATCCACCCCTTCCGATCTCTGATCTACCTGTGAATGTGCCTCCGACCTCAGTCAGCAATAATGATGATCAAGGAAATAATCAATCCAATGAAACTTCAGATACCAGTCCCAGTGATCCACCCTTACCATTGCCAATCCCTGATCCTTCTCAGAACTTACCTCAGACATCAGGGTGCAATAATGACGGTGAAGGAAATTCAGCCACACAACCTAAAGAGAGAAAACAGAATAAATTACAGTGGTTTTGGAAATTTGGACGGAACACCGTTGAGGCTATCTCCGAGAAAGTAGGAGGTGGTGCTGCCGAGGCGACGAAGTCTGCCAACAGTATTAGTAATCAAAGTAATTCATTGGCATCGCCACCAGCCTCACCTGCTGCTAATGGACATTGTAGTTCTGTTGGTTCCAGAGGAGATTCTGCAGACCAAAATATGATGGGAACTTTGAAGAACATTGGGCAGTCTATGCTTGACCATATTCAGGTGATTGAATCTGTTTTCCAGCAGGATCGGGGCCAGGGAGCTTCATCGGATAATTTATCTAAGAATGTTCTTGTTGGAAAAGGGCAGATTACTGCCATGACAGCTCTCAAGGAGCTTCGGAAAATCAGCAATCTTTTGTCTGAGATGTGA 2622 0.4211 MHRAVVDPLLSPILSSDSVSRRSEPEKGRFGDLRGLQWRINLGVLPSSSAASIDDLRRVTADCRRRYARLRRHLLVEPPVPKNGTNSSNLEMDNPLSQNPDSTWSRFFRNAELERLVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLKNPECGYRQGMHELLAPLLYVLQVDLERLSEVRKLYEDHFTDKFDGLLCQENDLTYSFDFRKSPDMTEDEIGSHGNAMKANSIDELEPEIQSIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMKGANGSVAMADFFSSSPVAGSHTGLPPVIEASMALYHLLSLADSSLHSHLLDLGVEPQYFYLRWLRVLFGREFSLDRLLIIWDEIFASDNSKVENSADDNIDYGFRILQSPRGAFISAIAVAMLLYLRSSLLATENPTTCLQRLLNFPENITIEKLLEKAKSLQDLALSIDISSSSLLLVESHYQSKMTSTRSTVLPSESVSPKTPLNFVPDSYWEEKWRVAQKAEERKKDVVENQIPTRKKGWTEKIKIRLRRTESDPPPSRVLSGQRGSKPSFRRSLLEDLRKALGAEENTEHEQRHDEILSEQDNISEAVEIEQQDSGCNSDNNSDDKCPSGNSGHEEDSSIYSDSTSPPNEANDHEIASEKNSATSYLSLDECNEILETSPIDPPLPISDLPVNVPPTSVSNNDDQGNNQSNETSDTSPSDPPLPLPIPDPSQNLPQTSGCNNDGEGNSATQPKERKQNKLQWFWKFGRNTVEAISEKVGGGAAEATKSANSISNQSNSLASPPASPAANGHCSSVGSRGDSADQNMMGTLKNIGQSMLDHIQVIESVFQQDRGQGASSDNLSKNVLVGKGQITAMTALKELRKISNLLSEM* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0700 873 MobiDBLite consensus disorder prediction 526 554 - -
Tpr5g0700 873 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 326 IPR035969 -
Tpr5g0700 873 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 302 441 IPR035969 -
Tpr5g0700 873 MobiDBLite consensus disorder prediction 593 647 - -
Tpr5g0700 873 MobiDBLite consensus disorder prediction 768 801 - -
Tpr5g0700 873 Gene3D - 305 447 - -
Tpr5g0700 873 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 97 282 - -
Tpr5g0700 873 MobiDBLite consensus disorder prediction 675 700 - -
Tpr5g0700 873 Pfam Rab-GTPase-TBC domain 113 173 IPR000195 -
Tpr5g0700 873 Pfam Rab-GTPase-TBC domain 265 366 IPR000195 -
Tpr5g0700 873 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 11 793 - -
Tpr5g0700 873 MobiDBLite consensus disorder prediction 767 801 - -
Tpr5g0700 873 ProSiteProfiles TBC/rab GAP domain profile. 28 366 IPR000195 -
Tpr5g0700 873 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 11 793 - -
Tpr5g0700 873 MobiDBLite consensus disorder prediction 659 703 - -
Tpr5g0700 873 SMART tbc_4 25 412 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0700 Tpr-Chr5 11755215 11760339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0700 K18469 - gmx:100812967 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3373 2 37253045 37257948 Tpr5g0700 5 11755215 11760339 PCT