Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3373 ATGCCACCGGCTCTATTGGATCCGCCATTGTCAGAAACATCGTTGGTGCCTTATTTAATCTCCGGCACCATTTCTCAGGAACCGGTACCGGAGAGTCGGTTATTTGAGGATCTTAGAGGTTTACGGTGGCGTATAAATCTTGGGGTTTTGCCACCTTGTTCTTCTTTAACTTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTCGAAGGAGGTATGCTAGTTTAAGAGGGCAGCTCTTGGTTGATCCCCACATTACAAAGGATGGAAGTAGTTCACCACCCAATCTTGTCATGGACAATCCACTTTCACAAAATCCAAACAGTACATGGGGTCGCTTTTTTCAAAATGCGGAGCTCGAGAGGATGGTGGATCAGGATTTATCACGTTTATACCCAGAACATGGTTTCTATTTCCAGACAAAAGGGTGTCAAGGCATATTAAGGCGTATTTTATTATTATGGTGTCTTAAACACCCTGAGTGTGGTTATAGACAAGGAATGCACGAGTTACTTGCTCCTTTGTTTTATGTTCTCCAAGATGATGTAGAGCACCATTCGGAAGTTCGAAAACTTCATGAAGATCACTTCACAGACAGATTTGATGGTCTCTTCTGTCAAGAGAATGATATTTCTTACAGCTTTGATTTTATAAAATCTCCAGACTTGTTAAATGATGAAATTGACTCCCATGGAGAAGGAGTGAAAATCAAGAGTCTTGATGAGCTTGATCCTAAGATACAGACGATTGTATTGCTAAGTGATGCTTATGGGGCTGAAGGTGAATTGGGCATTGTTTTATCTGAGAAATTCATCGAGCATGATGCTTACTGTATGTTTGAAGCTTTAATGAATGGGGCTCGCGGATCAGTTGCAATGGCCGACTTTTTCTCTTATTCTCCTGTTGCCGGGTCCCATACTGGTTTGCCACCTGTAATTGAAGCTTCTGCTGCACTGTATCATTTGTTGTCTCATGTGGATTCATCTTTATATAGCCATCTTGTTGAGCTTGGGGTTGAACCACAGTACTTTGCTCTCCGCTGGTTAAGAGTTTTATTTGGACGGGAATTTTCACTTGACAACCTCTTGATCATCTGGGATGAAATCTTTTTATCAGATAATAGTGAAATGGAAAAGCACGTGGAGGACAATGCAGACACTGGTTTTAGGCTCTTTCATTCATCTCGTGGACGATTTATCTCAGCTATTGCTGTGGCAATGTTACTTCATATAAGATCTTCACTACTTGCGACTGAAAATCCTACAACCTGTCTCCAGAGATTATTAAGCTTTCCTGAGGACACAGACATTAAAAAACTAATAGAGAAAGCTAAATCCTTGCAGACTCTTGCATTAAGTTCTGAAATTTCATCCTCGACACCTATGCTTATAGAGTATAACAAGGGTAAATCAGTTGTTGCAAGATCTATTAGCATTCCATGTGAATCAGGTTCACCAAAAACTCCTAACAGTTTGTTACCTGATAATAGCTACTGGGAAGAAAAGTGGAGAGTTGTTCACAGTGCTGAAGAACTTAAACAAGATGGAGTAGAAAAGCAGGTTCCATCTCAGAAAAAGAGATGGACAGAAAAGGTAAAGTTAAGTTTGAAAAGAACAGAATCCGAACCATCTTCCTCAACGATTAAAAGTGGTAAAAAGGAATCTAAGGCGTCTGTTAACCGCAGTTTGTTAGAAGATCTTTCCAAGAAACTCGGGTCAGAAGGAGATACGGAAAAACTCGGCTGTCATGAAGTGGGGCAACAAGATGATGGTTCTGACGACAGCAACAATTACGATGCTGATGATAGATGTCTAAGTAAAAACATCAGCAGTGAGAACTCATTTAACTCAGCTAGTCCTCCTAATGAGTTCAAAGATCTTGAAAATGAAAATATCTCACAGAAAAGTAGTGTTGGGTCCAATTTATCTGTTGATGAAATTAATGAAATTTCACATAGTAGTCCCATTGATTCGCCTCTCCCAATCTCTGATCATCCTGAGAATAACCTATCTCCTGCGCCAGGGCGCAATAATGATTCCACAGGAAATTTGGCAACAATTTCTAGGGATATAAAACTGAATAAATTCCAGTGGCTTTGGAAGTTTGGCCGTAATAAGGGCGAGTTATTGTCTGAGAAAAGAGGTCGTGCTTCTGAGCCTGTAAAACCGACCAACAATTTTAACAATAATCAAAGTAACACAGCACCCTCTTCTACAGCTGGTGAGCATTGCAGTTCTGTTAATTTTAAAGGCGATTCTGCAGACCAGAATGTGATGGGAACTTTGAGGAATATTGGGCAGTCCATGCTTGAGCACATTCAGGTGATTGAGTCTGCTTTCCAACACGAGCGTGGCCAGGGAGCTTCATTGGATAATAATATGTCTAAAAATGTTCTGGTTGGCAAAGGGCAGGTTACTGCCATGTCAGCTCTCACGGAGCTCCGCAAAATTAGCAACCTTTTGTCTGAGATGTGA 2475 0.4097 MPPALLDPPLSETSLVPYLISGTISQEPVPESRLFEDLRGLRWRINLGVLPPCSSLTSIDDLRRATANSRRRYASLRGQLLVDPHITKDGSSSPPNLVMDNPLSQNPNSTWGRFFQNAELERMVDQDLSRLYPEHGFYFQTKGCQGILRRILLLWCLKHPECGYRQGMHELLAPLFYVLQDDVEHHSEVRKLHEDHFTDRFDGLFCQENDISYSFDFIKSPDLLNDEIDSHGEGVKIKSLDELDPKIQTIVLLSDAYGAEGELGIVLSEKFIEHDAYCMFEALMNGARGSVAMADFFSYSPVAGSHTGLPPVIEASAALYHLLSHVDSSLYSHLVELGVEPQYFALRWLRVLFGREFSLDNLLIIWDEIFLSDNSEMEKHVEDNADTGFRLFHSSRGRFISAIAVAMLLHIRSSLLATENPTTCLQRLLSFPEDTDIKKLIEKAKSLQTLALSSEISSSTPMLIEYNKGKSVVARSISIPCESGSPKTPNSLLPDNSYWEEKWRVVHSAEELKQDGVEKQVPSQKKRWTEKVKLSLKRTESEPSSSTIKSGKKESKASVNRSLLEDLSKKLGSEGDTEKLGCHEVGQQDDGSDDSNNYDADDRCLSKNISSENSFNSASPPNEFKDLENENISQKSSVGSNLSVDEINEISHSSPIDSPLPISDHPENNLSPAPGRNNDSTGNLATISRDIKLNKFQWLWKFGRNKGELLSEKRGRASEPVKPTNNFNNNQSNTAPSSTAGEHCSSVNFKGDSADQNVMGTLRNIGQSMLEHIQVIESAFQHERGQGASLDNNMSKNVLVGKGQVTAMSALTELRKISNLLSEM* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3373 824 MobiDBLite consensus disorder prediction 539 553 - -
Tpr2g3373 824 ProSiteProfiles TBC/rab GAP domain profile. 33 373 IPR000195 -
Tpr2g3373 824 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 752 - -
Tpr2g3373 824 MobiDBLite consensus disorder prediction 531 560 - -
Tpr2g3373 824 MobiDBLite consensus disorder prediction 578 597 - -
Tpr2g3373 824 SMART tbc_4 25 419 IPR000195 -
Tpr2g3373 824 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 37 333 IPR035969 -
Tpr2g3373 824 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 308 448 IPR035969 -
Tpr2g3373 824 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 752 - -
Tpr2g3373 824 Gene3D - 312 456 - -
Tpr2g3373 824 Pfam Rab-GTPase-TBC domain 121 198 IPR000195 -
Tpr2g3373 824 Pfam Rab-GTPase-TBC domain 273 374 IPR000195 -
Tpr2g3373 824 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 105 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3373 Tpr-Chr2 37253045 37257948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3373 K18469 - gmx:100816501 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3373 2 37253045 37257948 Tpr2g3373 2 37253045 37257948 ECH
Tpr2g3373 2 37253045 37257948 Tpr5g0700 5 11755215 11760339 PCT