Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0311 ATGGATCCCGAAATGTCGCACCAAGATGGCAACTACAACGAGTCGCCGGCGAAGAGTGAGGTAATCGGAAACGGAACAGTTACCACTATGGCGAATTCGAGGTTGAAGCTGAGGGTGCACCCTAACAAGGATCACAAACCAGAAGGTTACGATGATCTTGATTTGGATTTCAATCCTTCCATTTTCAGCTCGTTGGAAAGATATCTTCCTTCGAATATGCTTGGTATTCCTCGTGATGATAAAGCTAAGTTCATGCGTGAGATTTTGCTTAAGTATCTTCCAAGTGGAGAACGTCACAGAACACAGAAGCATCAGGAATACAGAGAGAAGATAAAATCAAATTATCAGCCTTTACATCGCGAGTTGTATGCTCTGAATCCTACTACATTCTTTTTGCCGACATTTCTGAAAGCAATCAGTGATAACACAGAGCAAAGCTTTAGAAGCATAATATCTGAGCCCTCTCCAGGCATTTATGTATTTCCAATGCTTCAACCAGACTTTTGTGAGCTGTTGCTATCTGAGATTGAAAACTTTGAGAAATGGGTGGCTGAAGCAAAATTTCGGATCATGCGTCCCAATAGAATGAATAGATATGGTGCTGTACTTGATGACTTTGGCCTTGAACCGATGCTTGACAGGCTTATGGATGATTTTGTTCGTCCTTTATCTAGAGTGTTCTTTCCAGAAGTTGGTGGATCATCCCTGGATTCGCATCATGGATTTGTTGTTGAATATGGTGAAGATAAAGATCTTGACTTGGGTTTCCATGTGGATGACTCGGAAGTAACCTTGAATGTTTGCTTGGGCAAGGAATTTTCCGGGGGGGAGTTGTTTTTTCGTGGCTCAAGATGCGAGAGACATGTAAATACAGGAACTCAATCAGAGGAAGCCTTTGATTATTCTCATGTCCCTGGACGGGCTGTGCTTCATCGTGGTCGACATCGTCATGGTGCTAGAGCTACAACATCTGGCCATCGAATCAACCTCCTTATGTGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACTGTACCAAAAAGATTTCTCCGACTGGTGTGGTGAATGCAATCGTATGAAAAAGGAAAGACAGCGGTCCACATGTGCTGCTACTAGATTGGAATTGATCGCAAGAGAAGGTGAATCGACAGCATAG 1155 0.4312 MDPEMSHQDGNYNESPAKSEVIGNGTVTTMANSRLKLRVHPNKDHKPEGYDDLDLDFNPSIFSSLERYLPSNMLGIPRDDKAKFMREILLKYLPSGERHRTQKHQEYREKIKSNYQPLHRELYALNPTTFFLPTFLKAISDNTEQSFRSIISEPSPGIYVFPMLQPDFCELLLSEIENFEKWVAEAKFRIMRPNRMNRYGAVLDDFGLEPMLDRLMDDFVRPLSRVFFPEVGGSSLDSHHGFVVEYGEDKDLDLGFHVDDSEVTLNVCLGKEFSGGELFFRGSRCERHVNTGTQSEEAFDYSHVPGRAVLHRGRHRHGARATTSGHRINLLMWCRSSVFREMKLYQKDFSDWCGECNRMKKERQRSTCAATRLELIAREGESTA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0311 384 MobiDBLite consensus disorder prediction 1 24 - -
Tpr5g0311 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 237 336 IPR005123 -
Tpr5g0311 384 MobiDBLite consensus disorder prediction 8 24 - -
Tpr5g0311 384 SMART p4hc 156 335 IPR006620 GO:0005506|GO:0016705|GO:0031418
Tpr5g0311 384 Gene3D q2cbj1_9rhob like domain 157 336 - -
Tpr5g0311 384 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 383 - -
Tpr5g0311 384 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 19 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0311 Tpr-Chr5 4742538 4750335 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0311 - - gmx:100816390 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0261 3 3032168 3039442 Tpr5g0311 5 4742538 4750335 ECH
Tpr5g0311 5 4742538 4750335 Tpr5g0311 5 4742538 4750335 ECH
Tpr3g0261 3 3032168 3039442 Tpr5g0311 5 4742538 4750335 PCT