Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0261 ATGTCGAGACTGATGCTGAATCCGGCGAAGAATCATAAGCCGGAAACGTATGAGGACTTGAAACTCGATGGTTCTTCTTTGCTTTTAAGCTCGTTGGAGATGCACCTTCCGCGCCACTTGCTTCGTGCTCCTCGTGACCAGAAATTTACTTACATGCGCGATATTTTGCACGATTATGTGCCTCCAGCATTGCGCACCAGAGATCAAATGCAAAAAGAATATAGAGAGAAGATAATGTCAAGTTATCAGCCTCTGCATCGAGAGTTGTACACTATTGATCCTGTAGCATTCTTTGTACCGACATTTCTGAAAGCAATTAATGATAATACGAAAAAAAGCTTTAGAAGTATAATGTCTGAACCCGCTCCAGGCATTTTTACATTTGAAATGCTTCAACCACGTTTTTGTGAGTTACTGATATCTGAGGTCGAACATTTTGAGAAGTGGGTTGACAGAACAAAATTCACTGTAATGCGTCCCAATACAATGAATCAATATGGTGCTGTACTTGATGACTTTGGCCTTCAAACCATGCTTAACAAGCTTATGGAAGATTTTATTTCTCCATTGTCAAAAGTGTTCTATGCAGAACTTGGTGGATCAACCCTGGATTCTCACCATGGATTTATTGTTGAATTTGGCATGCATAGAGATGTTGAAATGGAATTCCATGTGGATGACTCAGAAGTTACCTTAAATGTTTGCCTGGGTAGGCAATTTTCTGGAGGAGAGTTGTACTTTCGGGGCATGCGATGCAATAAACATTTAAATACAATAAGTCGTTCAGAGGAGATCTTTGATTATTCGCATGTCCCTGGTTGTGCTGTGCTTCATCATGGTCGTCATCGCCATGGTGCTAGAGCCACAATTGCTGGTCATCGAGTCAACCTACTTCTGTGGTGCAAAAGTTCTTTATTTAGAGAAATGCAAAAGTATAAAAGAGATTTCTTTAGCTGGTGTACTGAGTGCAATCAAGAGAAGAAAGATAAGCAAGATAAGCTGCTCTCGGAATATGAGACTTCCGGAATGGGACCGTGGAGAGGAGAGAGTAAAGCAACCGCATAA 1065 0.4103 MSRLMLNPAKNHKPETYEDLKLDGSSLLLSSLEMHLPRHLLRAPRDQKFTYMRDILHDYVPPALRTRDQMQKEYREKIMSSYQPLHRELYTIDPVAFFVPTFLKAINDNTKKSFRSIMSEPAPGIFTFEMLQPRFCELLISEVEHFEKWVDRTKFTVMRPNTMNQYGAVLDDFGLQTMLNKLMEDFISPLSKVFYAELGGSTLDSHHGFIVEFGMHRDVEMEFHVDDSEVTLNVCLGRQFSGGELYFRGMRCNKHLNTISRSEEIFDYSHVPGCAVLHHGRHRHGARATIAGHRVNLLLWCKSSLFREMQKYKRDFFSWCTECNQEKKDKQDKLLSEYETSGMGPWRGESKATA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0261 354 MobiDBLite consensus disorder prediction 326 354 - -
Tpr3g0261 354 SMART p4hc 123 302 IPR006620 GO:0005506|GO:0016705|GO:0031418
Tpr3g0261 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 303 IPR005123 -
Tpr3g0261 354 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 2 337 - -
Tpr3g0261 354 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 337 - -
Tpr3g0261 354 Gene3D q2cbj1_9rhob like domain 124 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0261 Tpr-Chr3 3032168 3039442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0261 - - mtr:MTR_8g106610 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0261 3 3032168 3039442 Tpr5g0311 5 4742538 4750335 ECH
Tpr3g0261 3 3032168 3039442 Tpr3g0261 3 3032168 3039442 ECH
Tpr3g0261 3 3032168 3039442 Tpr5g0311 5 4742538 4750335 PCT