Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0245 ATGGCATTCACAAACAACAACATTAAACTATCATCATCAGAATTTCCATTCAACAATTCATCATCATCATCACAATTCTCACTCATCACTCTTTCTCGCTCCTCTTTCAATCTCTTTCTCTCTCATCCCAAATCCTCATTTCCTACAATCACTTTCTCATCTCTCAAAACAACCCATCATTCATCTCCCAACCCAACACCTCCATGGCTCACCAAAACAACCGATTCTCCCAAAAGGGTATCTGAAACTACCATCAAAGAAGAATCTTCTCATTTCCAACCTGATAAACCCAAAACCCCGGTCGAAAGAATCGTTTTTCGGTTAAGAAACTTAGGTTTAGTAGAAGATGATGAACAACAACAACAAAAACAAGAACAAGAAAAAGAAGTAGAAGAAGCTAAATTGAGTGCATTAACTGTTACTGGAGATGAGAAATTGAGTGAATTGTTGAAGAGAAAATGGGTTCGTCCTGATGTTTTATTGGATGATGATGGTGATGAAGAGGAGAAGATGGTGGTTCCATGGAAGAGAGAGGAAGAAAGAGAAATAGGTGGTGGTGGTAGTGGTGGTGGTGAAATTGAAGAAGAGGGGTTTAAGAAGAGGACATTAAAGGCTCCATCTTTGGCTGATTTGACACTTGAAGATGAATTGTTGAGGAGGTTAAGGAGAGAGGGTATGCGTGTTAGAGAGAGGGTTAATGTACCTAAAGCTGGACTTACACAAGAGGTTATGGAGAAGATTCATGAAAGGTGGAGGAGAGAAGAGTTGGTTAGGCTTAAGTTTCATGAGGAACTTGCTAAGAATATGAGGATTGCTCATGAGATTGTTGAGCGCCGAACAGGAGGATTGGTTACATGGAGAGCGGGAAGTGTTATGATGGTGTATCGTGGTAAAAATTATCAAGGTCCTGCTTCCCCGAAGGAACTCGATGTAGAGGAAGGTGATGGATTTCTTGTGCCGGATGTCTCGTCAGGAAGTTTGTCAACAATAAAGGACAGTGATGCAACCACATTCCTCGCAAATAGTGAGTCAGTTAGGAGGAACAACAAACAGCGAGAGAACTTGACAGAAGAGGAAATAGAGTACAATGCACTTCTTGATGGTTTAGGTCCTCGATTTGTTGAATGGTGGGGTACAGGAATACCTCCTGTTGATGCTGATTTACTTCCACGTGTCGTTCCTGGTTATAAAACACCTTATAGGCTTCTACCTGTTGGAATGCGTTCTCGACTAACAAGTGCAGAGTTGACTGATTTGAGGAAAATTGCAAAGTCACTTCCTTCTCATTTTGCCTTAGGGAGAAATAGAAATCACCAAGGCCTAGCATGCGCTATTCTTAAGCTTTGGGAGAAGAGTTTAATTGCAAAGATTGCTGTTAAACCCGGTATCCAGAATACAAACAATAAACTAATGGCCGATGAGCTTAGTACATTAACAGGAGGTACCTTGCTGCTAAGGAATAAATTTTACATTGTTATATATCGTGGGAAGGACTTTGTTCCAACAACTGTGGCTGCAGTTTTAGCTGAAAGACAAGAATTGACAAAACAAGTACAGGATGTTGAAGAGACGGTGCGGTGCAAAACTGTTGTTGCAACTCCATCTGGACAAGGTGAAGCAACAGCACCGGCAGGATCTTTAGCAGAGTTCTATGAGGCCCAGGCTCGTTGGGGAAGGGACGTATCTACCGAAGAACGGGAGAGGATGATAGAAGAAGCTACCAAAGCCAAGAATGTTAAACTTGTCAAACAAATTGAACACAAACTCTCTCTTGCCGGGACGAAAAAGCTTCGAGCAGAAAAGCTGTTAGCCAAAATAGAATCATCCATGGTTCCAGCTGGTCCTGATTATGACCAGGAAATAATCACAGATGAAGAACGTGTTGTGTTCCGCAGGATTGGTTTAAGAATGAAGCCATACTTACCACTTGGTATACGTGGTGTTTTTGATGGTGTCATTGAGAACATGCATTTGCATTGGAAACACCGAGAACTTGTAAAATTGATAACAAAACAAAAGACTCTTGCTTTCGTCGAAGACACGGCAAGGTTACTGGAATATGAGAGTGGTGGAATTCTCGTGGCAATAGAGAAAGTTTCTAAAGAATTTGCTCTTATTTATTATCGTGGCAAAAATTATAAGCGGCCCATTACTTTAAGGCCAAGAAACCTTCTAACAAAGGCAAAGGCATTGAAGCGTTCTGTAGCCATGCAACGGCATGAGGCTCTGAGTAACCATATTACAGAATTGGAAACAACAATTGAACAAATGAAACAAGAACTTGGTCTATCTGAAGATGAGTGGAGCATGACGGAAGGGAATGAAAATCAAGAATTTGATCAAAGTGAAGATGATGAAGATTCTGATGGTTTTGATGTTGAGGAAGACACGGATTGGGATGATGACGAGGACCCTGAGGTTTCCGAACTCCACATCGACGAGCATCCTTGA 2451 0.4145 MAFTNNNIKLSSSEFPFNNSSSSSQFSLITLSRSSFNLFLSHPKSSFPTITFSSLKTTHHSSPNPTPPWLTKTTDSPKRVSETTIKEESSHFQPDKPKTPVERIVFRLRNLGLVEDDEQQQQKQEQEKEVEEAKLSALTVTGDEKLSELLKRKWVRPDVLLDDDGDEEEKMVVPWKREEEREIGGGGSGGGEIEEEGFKKRTLKAPSLADLTLEDELLRRLRREGMRVRERVNVPKAGLTQEVMEKIHERWRREELVRLKFHEELAKNMRIAHEIVERRTGGLVTWRAGSVMMVYRGKNYQGPASPKELDVEEGDGFLVPDVSSGSLSTIKDSDATTFLANSESVRRNNKQRENLTEEEIEYNALLDGLGPRFVEWWGTGIPPVDADLLPRVVPGYKTPYRLLPVGMRSRLTSAELTDLRKIAKSLPSHFALGRNRNHQGLACAILKLWEKSLIAKIAVKPGIQNTNNKLMADELSTLTGGTLLLRNKFYIVIYRGKDFVPTTVAAVLAERQELTKQVQDVEETVRCKTVVATPSGQGEATAPAGSLAEFYEAQARWGRDVSTEERERMIEEATKAKNVKLVKQIEHKLSLAGTKKLRAEKLLAKIESSMVPAGPDYDQEIITDEERVVFRRIGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRNLLTKAKALKRSVAMQRHEALSNHITELETTIEQMKQELGLSEDEWSMTEGNENQEFDQSEDDEDSDGFDVEEDTDWDDDEDPEVSELHIDEHP* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0245 816 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 11 812 IPR045278 GO:0000375|GO:0003729
Tpr5g0245 816 Gene3D - 621 723 IPR035920 -
Tpr5g0245 816 SUPERFAMILY YhbY-like 411 503 IPR035920 -
Tpr5g0245 816 Coils Coil 740 767 - -
Tpr5g0245 816 Coils Coil 504 524 - -
Tpr5g0245 816 MobiDBLite consensus disorder prediction 58 98 - -
Tpr5g0245 816 SUPERFAMILY YhbY-like 212 304 IPR035920 -
Tpr5g0245 816 ProSiteProfiles CRM domain profile. 409 506 IPR001890 GO:0003723
Tpr5g0245 816 Coils Coil 114 136 - -
Tpr5g0245 816 ProSiteProfiles CRM domain profile. 620 720 IPR001890 GO:0003723
Tpr5g0245 816 MobiDBLite consensus disorder prediction 58 78 - -
Tpr5g0245 816 SUPERFAMILY YhbY-like 621 719 IPR035920 -
Tpr5g0245 816 Pfam CRS1 / YhbY (CRM) domain 411 495 IPR001890 GO:0003723
Tpr5g0245 816 Pfam CRS1 / YhbY (CRM) domain 214 296 IPR001890 GO:0003723
Tpr5g0245 816 Pfam CRS1 / YhbY (CRM) domain 623 698 IPR001890 GO:0003723
Tpr5g0245 816 MobiDBLite consensus disorder prediction 79 98 - -
Tpr5g0245 816 SMART CRS1_YhbY_2 622 709 IPR001890 GO:0003723
Tpr5g0245 816 SMART CRS1_YhbY_2 411 495 IPR001890 GO:0003723
Tpr5g0245 816 SMART CRS1_YhbY_2 213 296 IPR001890 GO:0003723
Tpr5g0245 816 ProSiteProfiles CRM domain profile. 211 307 IPR001890 GO:0003723
Tpr5g0245 816 MobiDBLite consensus disorder prediction 771 808 - -
Tpr5g0245 816 Gene3D - 211 310 IPR035920 -
Tpr5g0245 816 Gene3D - 410 503 IPR035920 -
Tpr5g0245 816 MobiDBLite consensus disorder prediction 767 816 - -
Tpr5g0245 816 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 11 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0245 Tpr-Chr5 3558770 3566720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0245 - - gmx:100788177 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0245 5 3558770 3566720 Tpr5g0245 5 3558770 3566720 ECH
Tpr3g0358 3 3864680 3870157 Tpr5g0245 5 3558770 3566720 PCT