Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0358 ATGAATCAAATGATCTCTTCAACACTGAGTTTTACATCATCCAAATTGAAATTAGTACCACTTTGTTGCAACATTTTCAACTCTTTTTCTTTCTCTTCTCTCTCAACAAAATCCAATTTCAACCAAGAAGAAGAAGAAGAAGACGATAAACCATCCAACTCCGCCATCGACCGAATCGTTCTCCAATTTCGCAATTTATCAGACCACCATGAACCAACCCTAACCCCATTCCCACCGCCAGATCATTTTTTGCACCGAGAATGGCTTCGTCCCGACGAGGCTGTTATCCCATCGGAGAACGAGGTGGTTCATCAGCAACAACTAACGAAGAAGAAGAAGAAGAAGAAGAGTGAAGTAATTGCAGCGCCGTGTTTGGCGAAAGAAGAACTGAGTCGATTGCGAAAAATTGGAATTCATTTGAAGGAGAAAGTTAGTATTCCCCAATCTGGCCTCACGCGTCCGGTGCTCCAAAAAATTCATGATCAGTGGAAAAACAATGAATTAGTGAAGCTCAAGTTTCATGAGCTACTTGCTCAGAATATGAACCTCGCTCATCACATCGTTCAGCATCGGACGGGAGGATTAGTTATATGGAGGTCAGGAAGTGTTATGTGGGTGTACCGTGGTGACAATTATCAATGTCCAATGAATGGGAACCGACATAGTTCAAAGGGAGGTGATGAAATGAGTGATTCAGTTATGTGGAATCAACAGCAGCCTGAGAACATGACACCTGAGGAGACGGAGTTCGACCGGATGCTTGATGATTTCGGTCCTCGGTTTGTTGATTGGTGGGATACAGGAATACTCCCTGTTGATGCAGATTTGCTTCCCCCTACAGTTCCTGATTACAGAACACCTCTTAGGCTACTTCCTGCCAAAATGCATCCGCGACTCACCAACGATGAGCACACAAAGATGCTGAAACTTGCCAAAGCTCTTCCTTGTCATTTTGCCTTGGGGAGAAATAGAAATCTTCAAGGTCTGGCATGTGCCATTCTTAAGCTGTGGGAGAAAAGTTTGGTCGCAAAGATTGCTGTCAAGCTTGGTGTCCAGAATACGAACAATGAACTGATGGCTCTGGAACTGAAGAAATTAACAGGAGGTACCTTACTGCTAAGGAATAAATACCACATCGTAATATATCGTGGGAAGGACTTCGTTCCAACCAGCGTGGCTGCCATTTTATCTGAAAGACAGCAATTGACGAAACAGGTGCTGGATGTTCAGGCGAAGGTGCGATGCAGATCTGTTGATGTAACTGGGGAAGATGTAACAACTGCACAAGCAGGATCATTGGCTGAGTTCAATGAGGCTCAAGCACCCTGGGGAAGGGAACTTACTATTGAAGAATATGAGAAGATGATGAAAAAGGCTTCTGAAACCAAGAATGTTAGGCTTATGAAAAAAATTGAACATAAATTAGCTGTTATACATGAACAGGCCGATGCCAAAAAATCAAGAGCAGAAAATATATTAGTTAAAATAGATGCATCTATGGTTCCAGCTGGTCGTGGTAACAGGGGGGAAACGATCACAGATGAAGAACGTGTTATGTTCCGTATGGTTGGTTTAAGAATGAAGGTGTACTTGCAACTTGGTACACGTGGTGTTTTTGATGGTGTCGTCAAGAATATGCATTTGCATTGGAGGCATCGAGAACTTGTTAAATTAATCACAAAACAAAAAACCCTTGCTTTTGTTGAAGAAACAGCTAATTTATTGGAATACAAGAGTGGTGGAATACTAGTAGCAATAGATAGACTTCCCAAAGGATTTTCTCTGATTTACTATCGTGGAAAAAATTATAAGCGGCCCATTACTCTACGGCTGGGAACCTCTTTTAACGAAGACAAAAGCACTGAAGCAATCAATATCCATGCAACGACATGA 1893 0.4226 MNQMISSTLSFTSSKLKLVPLCCNIFNSFSFSSLSTKSNFNQEEEEEDDKPSNSAIDRIVLQFRNLSDHHEPTLTPFPPPDHFLHREWLRPDEAVIPSENEVVHQQQLTKKKKKKKSEVIAAPCLAKEELSRLRKIGIHLKEKVSIPQSGLTRPVLQKIHDQWKNNELVKLKFHELLAQNMNLAHHIVQHRTGGLVIWRSGSVMWVYRGDNYQCPMNGNRHSSKGGDEMSDSVMWNQQQPENMTPEETEFDRMLDDFGPRFVDWWDTGILPVDADLLPPTVPDYRTPLRLLPAKMHPRLTNDEHTKMLKLAKALPCHFALGRNRNLQGLACAILKLWEKSLVAKIAVKLGVQNTNNELMALELKKLTGGTLLLRNKYHIVIYRGKDFVPTSVAAILSERQQLTKQVLDVQAKVRCRSVDVTGEDVTTAQAGSLAEFNEAQAPWGRELTIEEYEKMMKKASETKNVRLMKKIEHKLAVIHEQADAKKSRAENILVKIDASMVPAGRGNRGETITDEERVMFRMVGLRMKVYLQLGTRGVFDGVVKNMHLHWRHRELVKLITKQKTLAFVEETANLLEYKSGGILVAIDRLPKGFSLIYYRGKNYKRPITLRLGTSFNEDKSTEAINIHATT* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0358 630 Pfam CRS1 / YhbY (CRM) domain 299 383 IPR001890 GO:0003723
Tpr3g0358 630 Pfam CRS1 / YhbY (CRM) domain 126 208 IPR001890 GO:0003723
Tpr3g0358 630 Pfam CRS1 / YhbY (CRM) domain 513 599 IPR001890 GO:0003723
Tpr3g0358 630 Gene3D - 124 223 IPR035920 -
Tpr3g0358 630 Gene3D - 298 391 IPR035920 -
Tpr3g0358 630 PANTHER (CRM) DOMAIN PROTEIN, PUTATIVE-RELATED 11 611 - -
Tpr3g0358 630 Gene3D - 512 615 IPR035920 -
Tpr3g0358 630 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 11 611 IPR045278 GO:0000375|GO:0003729
Tpr3g0358 630 SUPERFAMILY YhbY-like 125 214 IPR035920 -
Tpr3g0358 630 ProSiteProfiles CRM domain profile. 297 394 IPR001890 GO:0003723
Tpr3g0358 630 SUPERFAMILY YhbY-like 299 390 IPR035920 -
Tpr3g0358 630 SMART CRS1_YhbY_2 125 208 IPR001890 GO:0003723
Tpr3g0358 630 SMART CRS1_YhbY_2 299 383 IPR001890 GO:0003723
Tpr3g0358 630 SMART CRS1_YhbY_2 512 599 IPR001890 GO:0003723
Tpr3g0358 630 SUPERFAMILY YhbY-like 511 609 IPR035920 -
Tpr3g0358 630 ProSiteProfiles CRM domain profile. 123 219 IPR001890 GO:0003723
Tpr3g0358 630 ProSiteProfiles CRM domain profile. 510 610 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0358 Tpr-Chr3 3864680 3870157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0358 - - vra:106765477 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0358 3 3864680 3870157 Tpr5g0245 5 3558770 3566720 PCT