Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0242 ATGCCATGTTCTAAAGAAGAAGCTCTTATTAGACTCTTCTACAATTCATCAAGCTCTTTCAAACTTCTCTTCCTTTTCATCTTCTCTTCTTCCACTTTGCTTATTAAATTCTTAAACTTCATTGGTAGCTACTCTTTATTCCAAAGGGATCAACAATATGAATATGATTATGAAGAAGAAGACGAACAAGAAGAAGAAGAAGAAGAAATTCGAGAAAGTTATTGTTATGAAGATTCTTTTGAGAAAGATCATTTAGTAGCTGATATAATTTGTGGTGGAGAATCTCTCGTGTTTTTGCATAATAATATTAACAAGTCTCAAAGGAATCATTATTCTTCATCTTTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTTATAACACCACAAGATAGTTTGATAGAAGAGTATGCAGAAGAAGAAAAAATTTCAACAGAAAGTTTATATGTTCATCAAGAATCACCAATTGTTTCAGATTTTGAGACAGAAACAAATGAAACAGAATTTCAAACAGAAGAAGAAGATGCTGATTCTATTCATGATTCTGTTCCTGATTCTGTTCCAGTTGAAAACAGGACCACTTCTCCTATCACAATTAATCTATACAAAAGTGATGACTTAGTAGAAGATATTGACAAAAATTATGATGAAAAACATGTTGATGTTGGAATTATTAAAAATAAGAAAGAGCATGAAGAAAATATTACAAGAGATGAGAGATTTTTTGTCATTGGTCCTACACAATTGGAGACAAATAAGAAGTTGATAATTGAAGAAAAAGATGATGAAGAAATATATGGTGATACAACAACTGTTGGTTCAACATCTAAAAGCTCTTCTGATTGGAGAAGCTCAATTCTTTGTAGAGATTCTGGAACTGATGAGCCTTTTTCTTCATCAAGAGGAAGTTGTCCTAAGTGGGAATCTTACACTGTTTTTCAAAAATATGATGAAGAAATGTCATTCCTAGAAAGGATTAGTGCACAAAAACTTCATGAAACAGAGTCTTTGAGGTCTATTAAAGTATCTCCAAGGTCAATTTCAGAGAGAATTGTGTACAAATTTTCAAGTATGAATAAAAAGCCAGAAGATATAAGTAACAATCCATATCATGAATTGGAGGGTGCATATGTTGCACAAATATGCTTAACATGGGAAGCACTTAATTGGAACTACAAGAATTTTCAAACAAAAAGAGCTTCAAATGTTGATGTTGGTTGTCCAGCAACAATTGCACAACAATTTCAGCAATTTCAAGTTTTGTTGCAAAGATATGTAGAGAATGAACCTTATGAGTATGGTAGAAGACCTGAGATATATGCTAGAGTGAGACATTTGGCACCAAAATTGCTCCTAGTCCCTGAATATAGAGATTCAGATGATGATCAAAAGGAGGAGAATATTGGGTTTAACACTAAAATATCATCAGCTTCATTTCTTGTGATAATGGAAGATGGAATCAGAACATTCATGAATTTCTTGAAGGCTGATAAAGAGAAACCATGTCAGATCATTGCATCTTACTTTAGGAGAAATCAAAGAGGCTTGGTTGATCCAACAATAATCCGTCTTATGAAAAAAGTTAATCAAAAGAAGAAGATGAAAGTTAAGGATATTCGTCGTTCCCACAAATGCTTGAGGAAAAGAAAGTTAAAGGAGGAAGAAGAGATGGAGATTTTGATGGCATTGATAGACTTAAAAATTGTATCAAGGGTTTTGAGAATGAGTGACATGAATGAAAATCAATTACATTGGTGTGAAGAGAAAAATAGCAAAGTTAGAGTCATTGATGGGAAACTACAAAGAGATTCCACTCCACTTTTTTTTCCATCACATTGA 1905 0.326 MPCSKEEALIRLFYNSSSSFKLLFLFIFSSSTLLIKFLNFIGSYSLFQRDQQYEYDYEEEDEQEEEEEEIRESYCYEDSFEKDHLVADIICGGESLVFLHNNINKSQRNHYSSSFEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEFITPQDSLIEEYAEEEKISTESLYVHQESPIVSDFETETNETEFQTEEEDADSIHDSVPDSVPVENRTTSPITINLYKSDDLVEDIDKNYDEKHVDVGIIKNKKEHEENITRDERFFVIGPTQLETNKKLIIEEKDDEEIYGDTTTVGSTSKSSSDWRSSILCRDSGTDEPFSSSRGSCPKWESYTVFQKYDEEMSFLERISAQKLHETESLRSIKVSPRSISERIVYKFSSMNKKPEDISNNPYHELEGAYVAQICLTWEALNWNYKNFQTKRASNVDVGCPATIAQQFQQFQVLLQRYVENEPYEYGRRPEIYARVRHLAPKLLLVPEYRDSDDDQKEENIGFNTKISSASFLVIMEDGIRTFMNFLKADKEKPCQIIASYFRRNQRGLVDPTIIRLMKKVNQKKKMKVKDIRRSHKCLRKRKLKEEEEMEILMALIDLKIVSRVLRMSDMNENQLHWCEEKNSKVRVIDGKLQRDSTPLFFPSH* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0242 634 PANTHER DNA LIGASE (DUF1666)-RELATED 1 634 - -
Tpr5g0242 634 MobiDBLite consensus disorder prediction 108 154 - -
Tpr5g0242 634 MobiDBLite consensus disorder prediction 116 152 - -
Tpr5g0242 634 PANTHER DUF1666 FAMILY PROTEIN 1 634 - -
Tpr5g0242 634 Coils Coil 108 149 - -
Tpr5g0242 634 Pfam Protein of unknown function (DUF1666) 394 632 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0242 Tpr-Chr5 3491600 3497435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0242 - - gsj:114425724 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0242 5 3491600 3497435 Tpr5g0242 5 3491600 3497435 ECH
Tpr3g0360 3 3879734 3883428 Tpr5g0242 5 3491600 3497435 PCT