Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0360 ATGACATGTCCCAAAGAACAAGCTCTTCTTAAACTCTTCAACAATGTCTCAACCTCTTTCCAGCTTCTCTTCCTACTTCTCTTTTCCATTGCCATTTTTCTTGTCACATTCTTAACCTTCACTGGTAGATTCCCCTTAATCCAAAGAGATCAACAATATGAATATGTGTATTCTGATGAAGACGAAGAAGATGAAGAAACTCGAGAAGAGTATTCTTGTGTTCATTTTTCTGACAAGGAAGAGCGTCAAAGGACTCATTCGTCTAATTCTGAAGAATTCATTAGTCCGCGAGAGAGTTTTGTTGAAGACGAGTCTGAAGAAAATGAATGTTCTAAAACATTGTCTACTCATAACTCGCCGCAAGTTTCTGATTTTGAAAATGAAGATGTAGAAGCATTTCGAGAAGACTTACGATCAAGAGATGTTGCTGATTCTGTTCAAAATTATGCTCAATTTGAAAACAGCCCCACCTCTTCTATGATCAACTTGAACCTATACAAAAGTAACAAAAACTACAAAGATGATCAAGTTGGTCTTGGAATAATTAAAAACAAAAAGGTGCAAGAAACAAGCCTCACAAGGGATGAGAGATTCTTTGTTTATGCTTCTAAACAATTGAACAGTAAGAAGTTGATTGTTGATGAAGAGAAAGACGACGACGACGATGAATCTACTTGCTCCTCTTCTGAATGTAGAAGCTCCATTCATTACAGGGATTCAGTAACTGAAGATGAATTTTCTACATCATCTAGAAGAAGTTGCCCCAAATGGGAATCATATACTTTGTTCCAAAGATATGATGAAGAAAATGCATTCTTAGACAGAATTAATTCACAAAACAAACTTCATGAAACTGAGTCATTAAGATCAATCCAAATGTCTCCAAGATCAATATCAGAGCGAATTGCGAGCAAGTTTTCAAATATAAACAAAAAACCAACTGATGTAGGTCACAATCCATATAGTGAGCTAGAGGCTGCATATGTTGCACAAATTTGCTTAACATGGGAAGCACTTAGTTGGAACTACTTAAATTTTCGTTCCAAACATGCGCCACAATCGCGCTACGATCTTGATATCGGTTGTCCTGCCACCATTGCACAACTATTCCAGCAGTTTCAGGTTTTGTTGCAGAGATATATAGAGAATGAGCCTTATGAGCATGGCAGGAGACCTGAAATCTATGCTAGAATGAGGCTTTTAGCACCAAAGTTACTCCTAGTGCCGGAATATCACGATTCAGATGAAGATCAGACGGATAGTGATTTTCACAGTAAGATATCCTCAGCTTCATTCCTTAAGATAATGGAAGGTGGGATCAGAACATTCATGAAATTTTTGAAGACTGATAAAGAAAAATCATGTCACATCCTAACATATTACTTTAGGAGAAACAAAAGAAGCATGGTTGATCCAACACTACTCAAGCTAATGAAGAAAGTAAATCAAAAGAAAAGGAGGAAGGTAAAGGATCTTGGTCATTCAGGAAAAGGTTTGAGAAAGAGAAAGTTAAAGATGGAAGAAGAGATTGAAGTATTAATGGCACTAATAGACTTAAAAGTGGTGTCAAGGGTTTTAAGAATGAAAGAGTTAAGTGAAGAACAATTGCATTGGTGTGAAAGAAAGATGAGCAAAGTGAGAGTTGTGGAAGGGAAACTTTGTAGAGATTATTCAACTCCACTTTTCTTCCCCTCACATTGA 1701 0.3668 MTCPKEQALLKLFNNVSTSFQLLFLLLFSIAIFLVTFLTFTGRFPLIQRDQQYEYVYSDEDEEDEETREEYSCVHFSDKEERQRTHSSNSEEFISPRESFVEDESEENECSKTLSTHNSPQVSDFENEDVEAFREDLRSRDVADSVQNYAQFENSPTSSMINLNLYKSNKNYKDDQVGLGIIKNKKVQETSLTRDERFFVYASKQLNSKKLIVDEEKDDDDDESTCSSSECRSSIHYRDSVTEDEFSTSSRRSCPKWESYTLFQRYDEENAFLDRINSQNKLHETESLRSIQMSPRSISERIASKFSNINKKPTDVGHNPYSELEAAYVAQICLTWEALSWNYLNFRSKHAPQSRYDLDIGCPATIAQLFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYHDSDEDQTDSDFHSKISSASFLKIMEGGIRTFMKFLKTDKEKSCHILTYYFRRNKRSMVDPTLLKLMKKVNQKKRRKVKDLGHSGKGLRKRKLKMEEEIEVLMALIDLKVVSRVLRMKELSEEQLHWCERKMSKVRVVEGKLCRDYSTPLFFPSH* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0360 566 PANTHER DNA LIGASE (DUF1666)-RELATED 76 566 - -
Tpr3g0360 566 PANTHER DNA LIGASE (DUF1666)-RELATED 1 77 - -
Tpr3g0360 566 PANTHER DUF1666 FAMILY PROTEIN 76 566 - -
Tpr3g0360 566 PANTHER DUF1666 FAMILY PROTEIN 1 77 - -
Tpr3g0360 566 MobiDBLite consensus disorder prediction 78 106 - -
Tpr3g0360 566 Pfam Protein of unknown function (DUF1666) 322 564 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0360 Tpr-Chr3 3879734 3883428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0360 - - gmx:100776190 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0360 3 3879734 3883428 Tpr5g0242 5 3491600 3497435 PCT