Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4760 ATGGCAGATGATCAGTCATATGAAGAGGCTATTGCAGAGTTGACGAAGCTTCTAAGTGAGAAAGCTGATCTTGGAGGTGTTGCTGCCGCAAAGATCAAGCAATTAACGACTGAGCTGGTGGCTGTCAAGTCTAATTCTTTTAACCCGGATGAGAGAATTCGAAATGGTTTCGTCCATTTCAAGAATGAAAAATTTCAGAAAAATCCAGAGTTGTATGGTGAACTTTCCAAAGGCCAGAGCCCAAAGTTTCTGGTTTTCGCGTGCTCGGACTCTCGAGTTTGCCCATCCCATGTTCTTGATTTTCAACCTGGTGAAGCCTTTGTGGTCCGAAACATTGCCAATATGGTTCCACCATATGACAAGAGCAAGTATTCAGAAACAGGGGCTGCCATTGAATATGCTGTCTTACATCTAAAGGTTGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGTATAAAGGGCCTCATGTCCATCCCAGATGATGGGACCACTGCAAGTGACTTCATAGAGCAATGGGTTCAAATTTGTAATCAAGCAAAGTCCAAAGTTAAAGAAGAAGCAAGCAAATTAAATTTCTCTGAGCAATGTACCAACTTGGAGAAGGAAGCTGTTAATGTATCTCTTGGGAACTTAATGACTTATCCATTTGTGAGAGATGCGGTTGTGAAGAAAACCATAGCTTTGAAAGGTGCACATTATGATTTTGTTAAGGGAGCATTTGAGCTGTGGGATATAGACTTCAAAATTTCACCCTCAATGTCCTTTTAA 774 0.4134 MADDQSYEEAIAELTKLLSEKADLGGVAAAKIKQLTTELVAVKSNSFNPDERIRNGFVHFKNEKFQKNPELYGELSKGQSPKFLVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYDKSKYSETGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNQAKSKVKEEASKLNFSEQCTNLEKEAVNVSLGNLMTYPFVRDAVVKKTIALKGAHYDFVKGAFELWDIDFKISPSMSF* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4760 257 Pfam Carbonic anhydrase 84 241 IPR001765 GO:0004089|GO:0008270
Tpr4g4760 257 SMART Pro_CA_2 76 246 IPR001765 GO:0004089|GO:0008270
Tpr4g4760 257 Gene3D Carbonic anhydrase 43 257 IPR036874 GO:0004089|GO:0008270
Tpr4g4760 257 PANTHER CARBONIC ANHYDRASE 5 257 IPR001765 GO:0004089|GO:0008270
Tpr4g4760 257 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 88 95 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tpr4g4760 257 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 132 152 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tpr4g4760 257 CDD beta_CA_cladeB 56 245 IPR045066 GO:0004089|GO:0008270
Tpr4g4760 257 PANTHER CARBONIC ANHYDRASE 5 257 - -
Tpr4g4760 257 SUPERFAMILY beta-carbonic anhydrase, cab 51 252 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4760 Tpr-Chr4 56113285 56119676 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4760 K01673 - gmx:100808326 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4760 4 56113285 56119676 Tpr4g4760 4 56113285 56119676 ECH
Tpr4g4760 4 56113285 56119676 Tpr2g0513 2 5875315 5880144 ECH
Tpr2g0513 2 5875315 5880144 Tpr4g4760 4 56113285 56119676 PCT