Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0513 ATGTCTACCTCTTCCATAAACGGCTTTAGTCTTTCTTCTTTGTCACATGCCAAAACTTCTATCAAGAAAACTACATTGAGACCCTTTGCATCACTTAACTCTTCTTCTTCCTCTTCATCTTCTAATTTCCCTTCTCTTATTCAAGACAAACCTGTTTTTGCTTCCTCTTCTCCTTTCATCACTCCAATTTTGAGAGAAGAAATGGGAAAGGGTTATGAAGAAGCAATTCAAGAACTCGAGAAATTGTTGAGGGAGAAGGCCGACTTGAAAGCCACGGCAGCTGAAAAGGTTGAACAAATAACAGCTCAACTTGGATCAGTTACAGCTCAAGCTGCATCATCATCTGATGGTATTCCAACATCTGAAGCCTCAGAGAGGATCAAAACTGGTTTCATTCACTTCAAGAAAGAGAAATATGACAAGAATCCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAAGCCCCCCGTATATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGATTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATGTTGCTAACTTGGTTCCACCATATGACCAGGCAAAATATGCTGGAACTGGAGCTGCTATTGAGTATGCAGTTCTGCATCTCAAGGTTTCCAACATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTGTCTTTTCCATTTGATGGACCCTACTCCACTGATTTCATTGAGGAGTGGGTCAAAATTGGTTTACCTGCAAAGGCAAAGGTGAAATCAAAGCATGGAGATGCACCTTTTGGAGAGCTATGCACACATTGTGAGAAGGAAGCTGTGAATGCTTCACTTGGAAACCTTCTAACCTATCCATTTGTGAGAGAGGGTTTGGTGAACGGAACATTGGCACTAAAAGGAGGATACTATGACTTTGTGAAGGGATCTTTTGAGCTTTGGGGACTTGAATTTGGTCTTTCATCCACTTTCTCCGTAAAAGATGTGGCCGCGATTCTACATTGGAAGCTATAA 1029 0.4237 MSTSSINGFSLSSLSHAKTSIKKTTLRPFASLNSSSSSSSSNFPSLIQDKPVFASSSPFITPILREEMGKGYEEAIQELEKLLREKADLKATAAEKVEQITAQLGSVTAQAASSSDGIPTSEASERIKTGFIHFKKEKYDKNPALYGELAKGQSPPYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGPYSTDFIEEWVKIGLPAKAKVKSKHGDAPFGELCTHCEKEAVNASLGNLLTYPFVREGLVNGTLALKGGYYDFVKGSFELWGLEFGLSSTFSVKDVAAILHWKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0513 342 PANTHER CARBONIC ANHYDRASE 1 331 IPR001765 GO:0004089|GO:0008270
Tpr2g0513 342 Gene3D Carbonic anhydrase 111 331 IPR036874 GO:0004089|GO:0008270
Tpr2g0513 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 162 169 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tpr2g0513 342 Coils Coil 65 99 - -
Tpr2g0513 342 CDD beta_CA_cladeB 130 319 IPR045066 GO:0004089|GO:0008270
Tpr2g0513 342 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 331 - -
Tpr2g0513 342 SUPERFAMILY beta-carbonic anhydrase, cab 124 326 IPR036874 GO:0004089|GO:0008270
Tpr2g0513 342 SMART Pro_CA_2 150 320 IPR001765 GO:0004089|GO:0008270
Tpr2g0513 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 206 226 IPR015892 GO:0004089|GO:0008270|GO:0015976
Tpr2g0513 342 Pfam Carbonic anhydrase 157 315 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0513 Tpr-Chr2 5875315 5880144 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0513 K01673 - gmx:100500448 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0513 2 5875315 5880144 Tpr3g2783 3 28624402 28627093 ECH
Tpr2g0513 2 5875315 5880144 Tpr2g0513 2 5875315 5880144 ECH
Tpr2g1730 2 20453265 20465626 Tpr2g0513 2 5875315 5880144 ECH
Tpr4g4760 4 56113285 56119676 Tpr2g0513 2 5875315 5880144 ECH
Tpr2g0513 2 5875315 5880144 Tpr4g4760 4 56113285 56119676 PCT