Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4132 ATGGGAGGACAATCTAGCAAGATGATGGTTGATGCTAATGATTGCACAAAAATGGGTGCCCATTCTGTTTATGCAGCTGATTTGAGCTCATATGAAGCTGCATGTGTTAAAGATCCAAACTTGCAAAGTTTTGATGAGTCCATTAAAGAGAGTACTAATAGGGTTATTAGTTCTCTTGCTAATGGTGTCGAGGTTAGGTCTTTATCTTTCGATTCGTTAAGAGAAGTTACTGATAGTTTGCTTGAGATGAACCATGAAGTAGTTAAAGTGATTTTGGATTGTAAAAGAGATATATGGGGTAACAAGGATTTGTTTGCTTTGGTTAATGATTATTTTGATAATAGTCTTCAAACATTGGAGTTTTGTAATTCACTTGAGAAATGTTTGAGACGGGCGCGTGAGAATCAAGTGATGGTTAAGTCGGTAATTACTTACTTTGAAGAAGAGGTGCAAAATGGGCTTGAAGGAGGGACTTGTGTGAAGACGTTGCAAGAGCTTAAGAATTTTAAGGATGCCGGTGACCCTTTTACAGAGGAGTTTTATTTGTTGTTTCAATCTGTTTATACGCAGCAGGCAACCATGTTGAAGAAATTGCAAATCAGAAAGAGAAAGCTTGATAAGAAATTGAAATCTCTCAAGTCGTGGAAGAGGGTGTCGAATGCGATTTTTTTGGCTGCTTTTGTTTCTGTGTTGATTTTCTCAGTGGTAGCAGCTTCTATTGCTGCACCACCGGTTGTAACAGCTTTGGCTGCGGCGTTGGTTGTTCCATTAGGGTCAGTTGGAAAATGGTGTAACTCACTTTTTAAGGGCTATGAGAAGGCTATTAAGGGACAAATGGAAGTAGTTAGCTCAATGCAGCTTGGTACTTACATTTCATTGAAGGACTTGGACAACATTCGAGTGCTTACAAACAAATTGGAAGTACAGCTTGAATCTTTATTGCAGAATGCTGATTTTGCGCTTAAAAATGAGGATGTGATTAAGCTTGCAATTGATGAGATTAAGAAGAATATAGAAACTTTTTCAGAGACATTGGAGACTCTAAGTTCAAATGCTGATAAATGCAGTCGACAGATACGAAAAGCAAGGACAGTGGTTATACAAAATATAATCAAAAGACCTGGTTGA 1128 0.3794 MGGQSSKMMVDANDCTKMGAHSVYAADLSSYEAACVKDPNLQSFDESIKESTNRVISSLANGVEVRSLSFDSLREVTDSLLEMNHEVVKVILDCKRDIWGNKDLFALVNDYFDNSLQTLEFCNSLEKCLRRARENQVMVKSVITYFEEEVQNGLEGGTCVKTLQELKNFKDAGDPFTEEFYLLFQSVYTQQATMLKKLQIRKRKLDKKLKSLKSWKRVSNAIFLAAFVSVLIFSVVAASIAAPPVVTALAAALVVPLGSVGKWCNSLFKGYEKAIKGQMEVVSSMQLGTYISLKDLDNIRVLTNKLEVQLESLLQNADFALKNEDVIKLAIDEIKKNIETFSETLETLSSNADKCSRQIRKARTVVIQNIIKRPG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4132 375 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 372 - -
Tpr4g4132 375 Coils Coil 296 323 - -
Tpr4g4132 375 Coils Coil 331 351 - -
Tpr4g4132 375 PANTHER UPF0496 PROTEIN 3-RELATED 1 372 IPR007749 -
Tpr4g4132 375 Pfam Protein of unknown function (DUF677) 41 370 IPR007749 -
Tpr4g4132 375 Gene3D - 86 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4132 Tpr-Chr4 48280832 48282583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4132 - - gmx:100782901 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0940 2 11345386 11347658 Tpr4g4132 4 48280832 48282583 ECH
Tpr4g4132 4 48280832 48282583 Tpr4g4132 4 48280832 48282583 ECH