Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0940 ATGGGATGTCAGCCCAGCAAGGAGACTGGTTCCAGTACTGATGTCCCAACACCGATTAAAATGGGCGCGCATTCTCTTTATGCGGCCGATTTAAGCTCTTATGAAGCTGCGTGTGTTGATGATCCGAACTTGCGATCCTTCGATATTACCATTCAGGAGCGTACTAACAGGGTGATCAACTCTCTTGCTCAAGGGATTGAGGTTCGTTCTATATCGCTTGAGTCACTAGGTGAAGTTACCGGCAGTCTTCTTGACATGAACCAGGAAGTTGTTAAAGTAATTTTGGAGTGCAAGCAAGATATATGGAACAAGAAGGATCGCGACTTGTTTGCCTTGGTGGAGGATTTTTTCGATAATAGTCTCCAGACATTGGAGTTTTGTAATGCTCTTGAGAAATGCTTGAAAAGAGCGCGAGAAAAACTTGTTGCAGTTAATTCTGTAATGACTTGTTTTGAGGAAGAGGTTCAAAATGGAGTTGAAGGGTCGACTTATTTGAAGACATTGAAAGGGCTTAAAGATTTTAAGGAAACCGGGGACCCTTTTACCGAAGAGTTTAATTCTTTGTTTCAGAAGGTTTCTACTCAACAATCATCAATGCTGATGAAATTGCTGATTAGAAAGCAAAAACTTGATAAGAAACTGAAATCTCTCAAGACATTGAAGAGGGTATCAAGTGTTATTTTCGTAGCTGCTTTTGTGGCTGTGTTAATTTTCTCGGTGGTCGCAGCTGCAATTGCTGCACCACCTGTTGTAACGGCTTTGGCCGGAGCGTTGGCTGTTCCAATAGGCTCAGTTGGAAAATGGTGTAACTCACTTTTTAAGAAATACGAAACAGCTTTAAAAGGCCAAAGAGAAGTAATCAGTTCAATGCATGCTGGTACTTATATTGCATTGGTGGATATGAATAACATTAAGGTACGTATCGATCAATTGGAAATAAAGATCGAATCCATGGTGCAAGTTGCTGACTTTGCTCTTGGAAATGAGGATGCTGTAAAGCTTGCGATCGATGAGATTAAGAATAAAATAGAAACTTTTGCGGATATTATCGAGAGTTTGAGTATGCAAGCTGATAAATGTAGTCGACAGACTATGAAAGCAAGGACAGTAGTTGTACAAAAGATAATTAAATACTCTATAGTTAACAGTTGA 1152 0.4002 MGCQPSKETGSSTDVPTPIKMGAHSLYAADLSSYEAACVDDPNLRSFDITIQERTNRVINSLAQGIEVRSISLESLGEVTGSLLDMNQEVVKVILECKQDIWNKKDRDLFALVEDFFDNSLQTLEFCNALEKCLKRAREKLVAVNSVMTCFEEEVQNGVEGSTYLKTLKGLKDFKETGDPFTEEFNSLFQKVSTQQSSMLMKLLIRKQKLDKKLKSLKTLKRVSSVIFVAAFVAVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKKYETALKGQREVISSMHAGTYIALVDMNNIKVRIDQLEIKIESMVQVADFALGNEDAVKLAIDEIKNKIETFADIIESLSMQADKCSRQTMKARTVVVQKIIKYSIVNS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0940 383 PANTHER UPF0496 PROTEIN 3-RELATED 1 378 IPR007749 -
Tpr2g0940 383 Coils Coil 200 220 - -
Tpr2g0940 383 PANTHER UPF0496 PLANT-LIKE PROTEIN 1 378 - -
Tpr2g0940 383 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
Tpr2g0940 383 Coils Coil 301 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0940 Tpr-Chr2 11345386 11347658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0940 - - gmx:100819451 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0940 2 11345386 11347658 Tpr4g4132 4 48280832 48282583 ECH
Tpr2g0940 2 11345386 11347658 Tpr2g0940 2 11345386 11347658 ECH