Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4127 ATGAAATTCACCACATTAATCACATTATGTATCCTCCTTCACTTCTCCAAACACACCTTAAGCACCATCACCACCACCACCCTTGAACAAAACTTCAAAGAAGCACCAAAATTCTACAACTCCCCAACCTGCACAACAATTACAAACCACACATGCTCAATCGAAGCCGTACACGTGGCAATGACACTTGACGTGTCATACATCCGTGGCTCCATGGCAGCAATCCTCTCCATACTCCAACACTCCTCATGTCCAGAAAACATTATTTTCCATTTCATTACTTCCTCTTCAAAACCTTCAACCGTTCTCAACAGAATTATAACTAACTCTTTTCCTTATCTAAAATACCAAATATACCCTTTCAACGACGCACCCGTCGCCGGATTAATCTCCACCTCCATTCGCTCCGCCCTTGATTGTCCGCTCAACTACGTCCGCACCTACCTCGCCGACATCCTTCCCGTCTGTATCTCTAAAGTTGTTTATCTTGACTCCGATTTGATCGTCGTCGACGACATTGCAAAACTCGCCGCTACTCCTCTCCGTTCAAACACTGTCCTCGCCGCGCCGGAATATTGTAATGCGAATTTCAGTATTTACTTTACTCCTTCGTTTTGGTCGAATCCTTCTCTTTCACTTACGTTCGCGAATCGTGAGGCTTGTTACTTTAATACTGGAGTTATGGTTATTGATCTTCAACGGTGGCGTTCCGGTGAGTATACGACGATGATTCGGGAGTGGATGGAGTTGCAGAAGAGAATGAGGATCTATGAATTGGGATCATTGCCGCCGTTTTTGTTGGTTTTTGCTGGGAGGATTACGCCGGTGGATCATCGGTGGAATCAGCATGGGCTTGGTGGTGATAATTTTCGTGGGCTTTGTAGGGATTTGCATCCGGGCCCGGTGAGTTTGTTGCATTGGAGTGGAAAGGGAAAACCGTGGGCCAGGCTTGATGGGAATCGGGCTTGTCCTTTGGATGCTTTGTGGGCTCCATATGATCTTCTCAAGACTCATTTTGCTATTGAGGTGTAG 1032 0.4612 MKFTTLITLCILLHFSKHTLSTITTTTLEQNFKEAPKFYNSPTCTTITNHTCSIEAVHVAMTLDVSYIRGSMAAILSILQHSSCPENIIFHFITSSSKPSTVLNRIITNSFPYLKYQIYPFNDAPVAGLISTSIRSALDCPLNYVRTYLADILPVCISKVVYLDSDLIVVDDIAKLAATPLRSNTVLAAPEYCNANFSIYFTPSFWSNPSLSLTFANREACYFNTGVMVIDLQRWRSGEYTTMIREWMELQKRMRIYELGSLPPFLLVFAGRITPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDGNRACPLDALWAPYDLLKTHFAIEV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4127 343 PANTHER HEXOSYLTRANSFERASE 4 343 - -
Tpr4g4127 343 Pfam Glycosyl transferase family 8 58 316 IPR002495 GO:0016757
Tpr4g4127 343 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 4 343 - -
Tpr4g4127 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 58 323 IPR029044 -
Tpr4g4127 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 335 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4127 Tpr-Chr4 48206045 48207545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4127 30 341 Glycosyltransferase AT3G50760 72.327 5.53e-175 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4127 K20893 - gmx:100783054 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4127 4 48206045 48207545 Tpr4g4127 4 48206045 48207545 ECH
Tpr2g0936 2 11323301 11325200 Tpr4g4127 4 48206045 48207545 ECH
Tpr2g0936 2 11323301 11325200 Tpr4g4127 4 48206045 48207545 PCT