Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0936 ATGTCACATGCACCACCACCACCGCCGCCACCACCACACAGCTTCAAACAAGCACCAAAATTCTACAACTCACCAAACTGCCCCACCATAACCTCCCTCACATGCTCCGACGAAGCAGTCCACGTAGCAATGACACTAGACATCAAATACCTCCGTGGCTCCATGGCCGCAATTCTCTCCGTTCTCCAACACTCTTCCTGTCCAGAAAACACCATCTTCCACTTCGTAACCGCCGCATCAAAAACAACCTCCACCATCATCCTCAACACTACACTCACTAACTCATTCCCTTATCTAAAATTCCAAATCTACCCCTTCCAAGACGACGTCGTATTAGGTCTAATCTCAACTTCAATCCGTTCCGCACTCGATTGTCCTCTCAACTACGCGCGAAATTACATGTCTAACCTTCTGCCGAATTGTGTTCGCAAAATCGTTTACCTTGATTCCGATCTTATTCTCGTTGACGACATTGCAAAACTTGCGAAAACGAATCTCGGAAACGACGCCGTTTTAGCTGCGCCGGAATATTGTAACGCGAATTTCAGTAACTATTTTACACCTACGTTTTGGTCCAATCCGTCGTTATCGTTAACGTTTGCGACCCGGAAGGCTTGTTATTTTAACACCGGAGTTATGGTGATTGATTTGGAGCGGTGGAGGATCGGAGAATATACGATGAAGATTACTGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTATGAGCTTGGTTCTTTGCCGCCGTTTTTGCTTGTTTTCGCCGGGAAAATTGTTCCGGTTGATCATCGGTGGAATCAGCATGGGCTTGGCGGTGATAATTTTCGTGGGCTTTGTAGAGACTTGCATCCGGGCCCGGTGAGTTTATTGCATTGGAGTGGGAAAGGTAAACCGTGGGCCAGGCTTGATTCTAACCGTCCTTGCCCATTGGATGCTTTGTGGGCCCCATATGATCTTCTTGAAACACCCTTTGCTCTTGAGGCCTAA 987 0.4732 MSHAPPPPPPPPHSFKQAPKFYNSPNCPTITSLTCSDEAVHVAMTLDIKYLRGSMAAILSVLQHSSCPENTIFHFVTAASKTTSTIILNTTLTNSFPYLKFQIYPFQDDVVLGLISTSIRSALDCPLNYARNYMSNLLPNCVRKIVYLDSDLILVDDIAKLAKTNLGNDAVLAAPEYCNANFSNYFTPTFWSNPSLSLTFATRKACYFNTGVMVIDLERWRIGEYTMKITEWMELQKRMRIYELGSLPPFLLVFAGKIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDSNRPCPLDALWAPYDLLETPFALEA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0936 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 41 308 IPR029044 -
Tpr2g0936 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 40 319 IPR029044 -
Tpr2g0936 328 Pfam Glycosyl transferase family 8 41 301 IPR002495 GO:0016757
Tpr2g0936 328 PANTHER HEXOSYLTRANSFERASE 14 328 - -
Tpr2g0936 328 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 14 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g0936 Tpr-Chr2 11323301 11325200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0936 15 326 Glycosyltransferase AT3G50760 72.327 2.74e-173 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0936 K20893 - gmx:100783054 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0936 2 11323301 11325200 Tpr2g0936 2 11323301 11325200 ECH
Tpr2g0936 2 11323301 11325200 Tpr4g4127 4 48206045 48207545 ECH
Tpr2g0936 2 11323301 11325200 Tpr4g4127 4 48206045 48207545 PCT