Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3692 ATGTCCATAAACTTACAGTTTCATGCCTTTGCCGGAAACCCTCTAAACTCAATTCCTGGCAACCCTCTTTCACCCTCCGCAGCTCTCGAATCTCTCAACGCCAGAATTCTAGGAAACGATCACTCTTCCCCATCCCCAAATTTCAAGGTGCTGCCTTTTAGAAATGGAAGGCCTTTAGTCTCTTCCACGGCCAGTTCCGGTGAATTTCTGCCGATTTGGCATCTGGGCTGGGTTAGTTTGGATGATCTTAGGGGTATCTTCGAAAATTCAGGTGCCCCGTTGAATGGAGACTCGTTGGTTTACTTGGGTTCGAGTGCAGAGGACGATGCCGTTTACTGGGCAATTGATGTTTCTGCTAAGGTACCTGAATTGGGTACCAACATGGATATGGAGTTGCGTTTCGTGGAGCTCCGGACGCTCATGGTGGCCACTGATTGGGAGAACTTGAAAGCAATGGAAAATTTGGCTATCGCTGGTAATGCCAAAGCACTGCTTGAATGGCATAATACTTCACAATTTTGTGGACATTGTGGAGAGAAAACTGTCTCAAAAGAAGCTGGGAGACGGAAGCAATGTTCGAATGATTCTTGCAAAAAAAGGATATATCCACGTGTTGATCAGGTGGTAATTATGCTTGTAATCGATAGAGAGAATGACCATGTCCTCTTGGGTACACGACCAAAGTTTATTTCTCAATTGTGGAGCTGCTTATCAGGTTTCACCGAGCCAGGAGAAAGCTTGGAGGAAGCTGTGAGAAGAGAAACTTGGGAAGAGTCTGGAATTGAAGTGGGCGAAGTTGTATACCACAGTTCTCAGCCATGGCCTGATGCTCGGTGGTTCAGTAGAGAAGATATACGAGAAGCATTGACGTTGGCTGACTACAAAAAAGGCCAGAAAACAGCAGCGTCAAAGGTAGAACAAATGTGTAAGGGAGTAGAAAAGAGTAGGAGCATGGCTGCAGATTTCAACGTCGAAAGCGGTGAACTTGCTCCAATATTTGTTCCTGGACCTTTTGCAATAGCCCATCACCTTATTTCCTCTTGGGCCTTCTCAGATCAAAATGTACTGTAA 1071 0.4566 MSINLQFHAFAGNPLNSIPGNPLSPSAALESLNARILGNDHSSPSPNFKVLPFRNGRPLVSSTASSGEFLPIWHLGWVSLDDLRGIFENSGAPLNGDSLVYLGSSAEDDAVYWAIDVSAKVPELGTNMDMELRFVELRTLMVATDWENLKAMENLAIAGNAKALLEWHNTSQFCGHCGEKTVSKEAGRRKQCSNDSCKKRIYPRVDQVVIMLVIDRENDHVLLGTRPKFISQLWSCLSGFTEPGESLEEAVRRETWEESGIEVGEVVYHSSQPWPDARWFSREDIREALTLADYKKGQKTAASKVEQMCKGVEKSRSMAADFNVESGELAPIFVPGPFAIAHHLISSWAFSDQNVL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3692 356 SUPERFAMILY Nudix 154 291 IPR015797 -
Tpr4g3692 356 Pfam NUDIX domain 209 281 IPR000086 -
Tpr4g3692 356 PANTHER NUDIX FAMILY HYDROLASE 276 355 - -
Tpr4g3692 356 PANTHER NUDIX FAMILY HYDROLASE 1 277 - -
Tpr4g3692 356 Pfam NADH pyrophosphatase zinc ribbon domain 170 201 IPR015376 GO:0016787|GO:0046872
Tpr4g3692 356 Gene3D - 42 203 - -
Tpr4g3692 356 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 204 350 - -
Tpr4g3692 356 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 50 167 IPR015375 GO:0016787
Tpr4g3692 356 ProSitePatterns Nudix box signature. 239 260 IPR020084 GO:0016787
Tpr4g3692 356 ProSiteProfiles Nudix hydrolase domain profile. 203 356 IPR000086 -
Tpr4g3692 356 CDD NADH_pyrophosphatase 208 349 - -
Tpr4g3692 356 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 1 277 - -
Tpr4g3692 356 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 276 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3692 Tpr-Chr4 42837785 42840592 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3692 K03426 - gmx:100793335 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3692 4 42837785 42840592 Tpr4g3692 4 42837785 42840592 ECH
Tpr4g3692 4 42837785 42840592 Tpr3g2804 3 29004378 29008350 PCT