Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2804 ATGGTGAATCTCGTACAATTTTCAAAATTGTTATCCTTAATTTGTCTCCCTAAAGATCTGCCATATAAATCCCCCCATATTCTGACAAGACTTTTCTCTCATTACAATTACAACCCCTTCTTCCGTATCACCACCATGTCCATAAACCTAAGCACCCACGTCTTCGCCGGAAACCCACTAAGATCCAAAACACCGAACAATAACGACCTATTTTCACCCACAACCGCACTCGAAACCCTCAAATCCCGAATCACCGACAACACTCATCACCAATCTCCTAATTTTAAGGTACTACCATTCAGAAACGGGAAGCCCCTCGCGACTTCAATTGGCGGTGAGTCATGGCAGCTCGGTTGGATCGGTCTGGGAGAACTGAGTCCTGAATTGAGCGCTGGTGAATCGTTTGTTTATCTTGGTTCGGATGTTGACGAAGATGCGGTTTACTGGACGATTGATGTGTCTGGAGAGGAGATTGGGTTTGTTCCTGAATTTGGTGGTGTGCGGTTTAGCTTTGTGGAGCTTAGAACCCTTATGGTTGCCACTGATTGGGTTGATTCCAAATCTATGGGAAACTTGGCTATTGCTGGTCATGCCAGAGCACTGTTAGAATGGCATAAGATATCACTTTTTTGTGGACATTGTGGAGAGAAAACAGTCCCAATGGAAGCTGGGAGACGGAAGCAGTGTTCAAATGAATCGTGCAAAAAGAGGATATATCCACGAGTTGATCCGGTGGTCATTATGCTGGTAATTGACCAAGAGAATGATCGTGCCCTTTTGAGCAAACAATCTAGATTTGTGCCTAGAATGTGGAGTTGCTTAGCAGGTTTTATAGAGCCAGGAGAAAGCTTGGAGGAGGCTGTGAGAAGAGAAACTTTGGAGGAGACTGGTATTGAAGTTGGAGAAGTTGTATATCACAGTTCTCAGCCATGGCCTGTTGGACCGAACAGCATGCCATGTCAGCTGATGGTTGGATTCTTTGCATATGCTAAATCCCTTGAAATTAATGTCGACAAGGAGGAGTTGGAAGATGCTCAGTGGCACAGTAGAGAAGAAGTAAGAAAAGCTCTGACATTTGCCGAGTACAAGAAAGCTCAAACAACTGCAGCAGCAAAGGTAGAACAAATGTGTAAAGGAGTAGAAAAAACTCACAGCTTGTCTACCGATTTCAATGTGGAAAGTGGTGAACTTGCACCGATGTTTGTTCCTGGACCCTTTGCAATAGCCCATCACCTTATTTCCTCTTGGGCATTCCCCGATAAAAATATTAACGGCAGTGAATTACATTCAAAACAACCAATTGGTTCTGCGTCAAATTTGTAG 1323 0.4399 MVNLVQFSKLLSLICLPKDLPYKSPHILTRLFSHYNYNPFFRITTMSINLSTHVFAGNPLRSKTPNNNDLFSPTTALETLKSRITDNTHHQSPNFKVLPFRNGKPLATSIGGESWQLGWIGLGELSPELSAGESFVYLGSDVDEDAVYWTIDVSGEEIGFVPEFGGVRFSFVELRTLMVATDWVDSKSMGNLAIAGHARALLEWHKISLFCGHCGEKTVPMEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDQENDRALLSKQSRFVPRMWSCLAGFIEPGESLEEAVRRETLEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYAKSLEINVDKEELEDAQWHSREEVRKALTFAEYKKAQTTAAAKVEQMCKGVEKTHSLSTDFNVESGELAPMFVPGPFAIAHHLISSWAFPDKNINGSELHSKQPIGSASNL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2804 440 Gene3D - 79 240 - -
Tpr3g2804 440 Pfam NADH pyrophosphatase-like rudimentary NUDIX domain 97 204 IPR015375 GO:0016787
Tpr3g2804 440 ProSiteProfiles Nudix hydrolase domain profile. 240 370 IPR000086 -
Tpr3g2804 440 ProSitePatterns Nudix box signature. 276 297 IPR020084 GO:0016787
Tpr3g2804 440 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 241 385 - -
Tpr3g2804 440 PANTHER NUDIX HYDROLASE, NUDC SUBFAMILY 46 422 - -
Tpr3g2804 440 Pfam NUDIX domain 245 359 IPR000086 -
Tpr3g2804 440 CDD NADH_pyrophosphatase 244 417 - -
Tpr3g2804 440 PRINTS NUDIX hydrolase family signature 271 285 IPR020476 -
Tpr3g2804 440 PRINTS NUDIX hydrolase family signature 285 300 IPR020476 -
Tpr3g2804 440 Pfam NADH pyrophosphatase zinc ribbon domain 209 239 IPR015376 GO:0016787|GO:0046872
Tpr3g2804 440 SUPERFAMILY Nudix 192 370 IPR015797 -
Tpr3g2804 440 PANTHER NUDIX FAMILY HYDROLASE 46 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2804 Tpr-Chr3 29004378 29008350 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2804 K03426 - gmx:100780473 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3692 4 42837785 42840592 Tpr3g2804 3 29004378 29008350 PCT