Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3213 ATGATACCCTCCATCAACGGCGATTCTTTCGCAACCACCGTTATAATCAAGATCGCCGCACTCTTCACCGTCGCCATCACTTTCTTCTGCCTCGGTAAAAACTGGTCCATCAACAATCAACAACTCATCTTCTTCACCGCCACCACAACAACAATATCCGATCAAGTCACCACATCCCCTAATTTCAACAAATTCTCCAACATCTCCGCCATAATCAATCATAACCAAACCCTAAAAACACCAGAAGAACCACTGAAAATCAAGAAATTAGGAGTCCTCAATGAGGACGGAACAATGTCGAATGAATTCGAGATTGGGGAATTTGATCCGGATTTTGTGGATGATTCGGTTAACACGACACGAGTTGATGATTCAAATGATGAATTGAAATTTACGGTGAAGAAGTTTACGTTGTGTTCAAGTAACATGAGTGATTATATACCGTGTTTGGATAATGTAGAGGCGATTGGGAAGCTGAAATCGGTGGAGAAAGGGGAAAGGTTTGAGAGGCATTGTCCTGTTGCTGAGAAACGGTTTAATTGCTTGGTTCCGCCACCTAAAGGTTACCGTTCTCCGATTCCATGGCCCAAAAGCCGCGACTTGGTGTGGTATAATAATGTTCCCCACAATCGTCTTGTGGAAGATAAAGGAGGTCAAAATTGGATTACCAGAGACCAGGATAAGTTCAAGTTTCCAGGAGGTGGCACCCAATTCATACATGGAGCAGATCAATACTTGGACCATATTTCTAAGATGGTTCCTAACATCACATTTGGTCAGAATATAAGAGTTGCACTTGATGTTGGCTGTGGTGTAGCTAGTTTTGGGGCATACTTATTGTCAAGAAATGTCATAACCATGTCCGTTGCTCCCAAGGATGTTCATGAGAATCAGATCCAATTTGCTCTTGAGCGTGGTGTCCCAGCAATGGTGGCAGCGTTTGCAACTAGACGTTTATTATATCCAAGTCAAGCTTTTGATTTGATACATTGTTCGCGCTGCAGAATTAATTGGACTCGAGATGATGGTATTTTGCTGCTTGAAATTAATAGGATGCTAAGGGCAGGAGGGTACTTTGTCTGGGCTGCCCAACCAGTTTATAAACACGAGCAAAATTTAGAAGAACAATGGCAAGAGATGCTTAATCTTACTACCCGTCTTTGCTGGAAGTTTTTGAAAAAAGATGGCTATGTTGCAATATGGCAGAAACCCTCCGACAATAGCTGCTATCTAAACCGTGAGGCAAAAACTAACCCTCCACTCTGTGACCCAAGTGATGATCCAGACAATATCTGGTATGTTAATTTAAAAGCATGCATCTCCCCATTGCCTGAGAATGGATATGGAGCAAATCTTACCAAATGGCCTGCACGTTTGCAAACTTCACCTGACAGGCTTCAAAGCATAAAACTCGATGCTTTCAAATCCAGAAACGAGCTTTTTAAGGCCGAATCAAAATATTGGAATGAGATAATAGAATATTATGTACGTTGTTTACATTGGAAGACAACGAGATTAAGAAACGTTATGGACATGAGAGCTGGTTTTGGAGGATTTGCAGCTGCATTGATTAATCAAAATCTTGACAGCTGGGTTATGAATGTTGTTCCTGTTAGTGGCCCAAACACCTTGCCTGTGATATATGACCGAGGCCTGATTGGAGTTATGCATGACTGGTGTGAGCCATTTGATACTTATCCAAGAACCTACGATCTTCTGCATGCTTCAAACCTGCTTTCTGTTGAGAAGAAAAGATGCAATGTCTCATCAATCATGCTTGAGATGGATCGGATACTTAGACCTGGTGGAGTAGTATACATCGATGATACTCTTTCTATCATGGATGAGCTTGTGAAGATTGCCAAAGCTCTCGGCTGGCGAGCTGCATTGCGAGAAACAATTGAGGGTCCACATACAAGTTACAGACTCTTGGTTTGTAACAAGGACCTACCACATGGTTGA 1962 0.422 MIPSINGDSFATTVIIKIAALFTVAITFFCLGKNWSINNQQLIFFTATTTTISDQVTTSPNFNKFSNISAIINHNQTLKTPEEPLKIKKLGVLNEDGTMSNEFEIGEFDPDFVDDSVNTTRVDDSNDELKFTVKKFTLCSSNMSDYIPCLDNVEAIGKLKSVEKGERFERHCPVAEKRFNCLVPPPKGYRSPIPWPKSRDLVWYNNVPHNRLVEDKGGQNWITRDQDKFKFPGGGTQFIHGADQYLDHISKMVPNITFGQNIRVALDVGCGVASFGAYLLSRNVITMSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEINRMLRAGGYFVWAAQPVYKHEQNLEEQWQEMLNLTTRLCWKFLKKDGYVAIWQKPSDNSCYLNREAKTNPPLCDPSDDPDNIWYVNLKACISPLPENGYGANLTKWPARLQTSPDRLQSIKLDAFKSRNELFKAESKYWNEIIEYYVRCLHWKTTRLRNVMDMRAGFGGFAAALINQNLDSWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDLLHASNLLSVEKKRCNVSSIMLEMDRILRPGGVVYIDDTLSIMDELVKIAKALGWRAALRETIEGPHTSYRLLVCNKDLPHG* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3213 653 Gene3D Vaccinia Virus protein VP39 243 412 IPR029063 -
Tpr4g3213 653 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 650 IPR004159 GO:0008168
Tpr4g3213 653 PANTHER METHYLTRANSFERASE PMT12-RELATED 6 650 - -
Tpr4g3213 653 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 181 389 IPR029063 -
Tpr4g3213 653 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 484 628 IPR029063 -
Tpr4g3213 653 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 145 648 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3213 Tpr-Chr4 38115605 38122812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3213 - - lang:109340023 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3213 4 38115605 38122812 Tpr4g3213 4 38115605 38122812 ECH
Tpr3g0068 3 790366 797785 Tpr4g3213 4 38115605 38122812 PCT