Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0068 ATGAAATCACCAATTAATCTAGAATTTCTCAGAACAACACACGCTCTCAAGATCGGTGCTTTCTTTTTCATTTCAATCACTTTCTTCTACTTAGGTAAACACTGGTCCGATGGCTATCAACAGCTCATTTTCTTCACACAAGATTCCGACTCAGATCCCAATTCCAATCACGAAGTTTCAATTTCACCTAATTTCAACAAATCATTCAATGTTTCTTCATTAATTGATCACAATGATGTAGAAAAAGTTCCTGAAAAAACCCTAACACAACCATCGCCGGCGACACAACCACCGCCGGAGACACAACCGCCACCTCCACCTCCGGCGGTGGATGATTCGGTTGAGAAATTCGGGATCGTGAATGAGAATGGAACGATGTCGGAGGAGTTTGAGGTTGGGAGTTTTGATCCGGAAATGGTGGATGATTGGGTTAATGAAACGCAGGTTGAGAAAGAAGGTTCTGAGAGTGTTACGAAATTTGTGATTAAGAAATTTGGGTTGTGTAGTAGAGATATGAGTGAGTATATACCTTGTTTGGATAATGTGGAAGCGATTAAGAAGTTGCCGTCGACTGAGAAAGGTGAAAGATTTGAACGGCATTGTCCTGAAGAAGGTAAAAGGTTGAACTTGAATTGTTTGGTTCCTGCACCTAAAGGGTACCGTGCCCCAATTCCATGGCCTAAAAGCCGAGATGAGGTTTGGTTCAGTAATGTTCCTCATACTCGTCTTGTTGAAGATAAAGGTGGCCAAAACTGGATTTCAAGAGACAAAAATAAGTTTAAATTTCCGGGAGGTGGTACACAATTTATACACGGGGCAAATGAATACTTGGACCATATTGCTAAGATGATTCCTGAAATTACATTTGGTCGGCATATACGAGTTGCTCTTGATGTTGGCTGTGGGGTGGCTAGTTTTGGTGCGTATTTACTGCAACGGAATGTTGTGACCTTGTCTGTAGCTCCCAAGGATGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGGGTGCCGGCCATGGTGGCAGCATTTGCAACTAGACGGTTATTATATCCAAGTCAAGCTTTCGACTTGATACACTGTTCACGCTGTAGAATTAATTGGACTCGAGATGATGGGATATTGCTGCTTGAAGTTAATAGGATGCTAAGAGCAGGAGGGTATTTTGTATGGGCTGCCCAGCCGGTTTATAAGCACGAAGAAGTTTTAGAAGAACAATGGGAAGAAATGCTTAATCTTACAACTCGACTCTGCTGGAAGTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCTTTTGACAATAGCTGCTATTTAAACCGCGAGGCAGGAACTAAACCTCCTCTATGCGACCCAAGTGATGACCCTGACAATGTTTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAATGAATATGAAGCCAAAGTTACCGATTGGCCTGCACGTTTGCAAACCCCACCCAATAGGCTTCAAAGCATAAAACTTGATGCTTTTACATCCAGAAAAGAGCTATTTAAGGCAGAATCGAAGTACTGGAATGAGATAATAGCAGGCTATGTTCGTTCTATGCGCTGGAAGAAGATGGCATTAAGAAATGTTATGGACATGCGGGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGCGCAGAAACTTGACTGCTGGGTTATGAATGTCGTTCCTGTTAGTGGTTCAAACACCTTGCCTGTCATATACGACCGCGGATTAATTGGAGTCATGCATGACTGGTGTGAACCATTTGACACCTATCCAAGAACTTATGATTTCCTGCATGCAGCAAATCTGCTTTCAGTCGAGAAGAAAAGATGCAATGTGTCATCAATTATGGTTGAGATGGATCGGATACTAAGACCTGGTGGACGTGTATACATCCGCGATTCTCTTGCCATAATGGATGAACTTCAAGAGATTGCCAAAGCAATAGGCTGGCACACGACACTACGAGACACAGCCGAGGGACCTCATGCAAGTTATAGGATCTTGGTTTGTGATAAACATCTGCTACGCGCTTCGAAGCAATGA 2064 0.4273 MKSPINLEFLRTTHALKIGAFFFISITFFYLGKHWSDGYQQLIFFTQDSDSDPNSNHEVSISPNFNKSFNVSSLIDHNDVEKVPEKTLTQPSPATQPPPETQPPPPPPAVDDSVEKFGIVNENGTMSEEFEVGSFDPEMVDDWVNETQVEKEGSESVTKFVIKKFGLCSRDMSEYIPCLDNVEAIKKLPSTEKGERFERHCPEEGKRLNLNCLVPAPKGYRAPIPWPKSRDEVWFSNVPHTRLVEDKGGQNWISRDKNKFKFPGGGTQFIHGANEYLDHIAKMIPEITFGRHIRVALDVGCGVASFGAYLLQRNVVTLSVAPKDVHENQIQFALERGVPAMVAAFATRRLLYPSQAFDLIHCSRCRINWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWKFLKKDGYIAVWQKPFDNSCYLNREAGTKPPLCDPSDDPDNVWYVDLKACISELPKNEYEAKVTDWPARLQTPPNRLQSIKLDAFTSRKELFKAESKYWNEIIAGYVRSMRWKKMALRNVMDMRAGFGGFAAALIAQKLDCWVMNVVPVSGSNTLPVIYDRGLIGVMHDWCEPFDTYPRTYDFLHAANLLSVEKKRCNVSSIMVEMDRILRPGGRVYIRDSLAIMDELQEIAKAIGWHTTLRDTAEGPHASYRILVCDKHLLRASKQ* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0068 687 PANTHER METHYLTRANSFERASE PMT12-RELATED 14 682 - -
Tpr3g0068 687 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 513 657 IPR029063 -
Tpr3g0068 687 MobiDBLite consensus disorder prediction 86 108 - -
Tpr3g0068 687 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 174 679 IPR004159 GO:0008168
Tpr3g0068 687 MobiDBLite consensus disorder prediction 91 108 - -
Tpr3g0068 687 Gene3D Vaccinia Virus protein VP39 273 438 IPR029063 -
Tpr3g0068 687 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 682 IPR004159 GO:0008168
Tpr3g0068 687 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 198 417 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0068 Tpr-Chr3 790366 797785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0068 - - gmx:100800414 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0068 3 790366 797785 Tpr4g3213 4 38115605 38122812 PCT