Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2956 ATGGGCGATCTTCATCTAAACGGTGTCGTTTTCGGGGAGGATCGCCCTTACTCCTCCTCACCGCCTTCGCCGCCGCTTCCTGTATTGAATCCTGATCCGTCGGTTGTTATGGAGGAGGCTTGGTCGGCGGCTGAGGAAACTACCGCCGAGATTCTCCGCCGGATTCAACCTACTCTCGCCGCCGATAGAAGGAGGAGAGAGGTTGTTGATTATGTTCAGAGACTGATTCGTTTTGGTGCTCGTTGCGAGGTTTTTCCATATGGGTCAGTTCCATTAAAAACATATCTTCCGGATGGAGATATTGATCTAACTGCACTTAGTTGTCAAAACATCGAGGATGGCTTAGTATCTGATGTTCATGCTGTTCTTCGGGGAGAGGAAAATAATGAAGCTGCTGAATATGAAGTAAAGGATGTTCGTTTCATTGATGCAGAGGTTAAGCTTGTAAAATGTCTTGTACAGAATATTGTTGTAGACATCTCTTTCAATCAGTTAGGAGGACTTAGTACATTATGTTTTCTTGAGAAGGTTGACCGCCTTGTAGCCAAGGATCATATCTTCAAACGTAGTATTATCCTGATAAAAGCATGGTGCTACTATGAGAGTCGTATTCTTGGTGCCCACCATGGGCTGATCTCTACATATGCTTTAGAAACACTGGTTCTGTATATTTTCCATCGATTTCATATGTCCTTAGATGGTCCTCTAGCAGTTCTCTACAGATTTTTGGACTATTTCAGCAAATTTGATTGGGACAATTATTGTGTAAGTTTGAAGGGACCAGTTGGCAAATCTTCTCCTCCTGATGTAGTAGCTGATGCACTGGAAAATGGGGGAAATACTCTGCTGACTGATGAATTCATCAGAAGCTGTGTGGAATCATTCTCGGTACCTCCAAGGGGGATTGATCTAAATTTGCGTGCATTTCCCCATAAACATCTGAACATCATTGATCCATTAAAGGAAAACAACAACCTTGGCCGTAGTGTCAATAAAGGTAATTTCTATCGAATACGTAGTGCATTTAAGTATGGTGCCCGTAAACTTGGCTGGATTCTTATGTTATCGGAAGATAGAATAGCGGATGAGCTTAATAGGTTCTTTGCAAACACTTTGGATAGGCATGGAAGCAACCAAGGGAATGAGGACAATTCATTTTTGTGTTTATCTAGTGGATCCAAGGATATGATGACTGGAAATCAACATAATTATGAAATTAGAAATGAAAGAGAAAGATATGTAGTAAAAGATGTCTCTTCTATGTCAGGGCCATCATTTGAATCCTCTGGGGATGGAAATTCAGTAGCAACTTACAAACTTGGTGAAGATTCTAAAAATGTTGCAACATCCGAAGTCTTGGGTATTGCAAGCACTAATGGTTTGCCATATTGTTCAAATGGGAAAGCTGAACATATTACTTGTAGCGACACAGATGTAAATTCTGTTTTTGATGATGAGAAAGAGAAGCATGGTATGGTAAGCAATTCTGTCAGATCACATACTGTTGAAAAGAATATGGCATCTAATGGTTCAACAGTTGAAAATGATTTGTTTCATAGTGATAGATACAATCCTAGTGTTCCTGGGGGACATGAAGCTTCGAAATCATTGTTAGACCTTGCTGGGGATTATGACAGTCACATTGCAAACCTACAATATGGCCAGATGTGCAATGGTTATCCTGTCTCTCCTGTTGTGGTCCCTAGTCCTCCTAGGTCTCCCAAGTTTCATAATCGGAACCCCTGGGAAACTGTTCGTCAATGTCTACAGATGAACCATGGCATTCATCCTCAGACAAACTCAAATTGTGTTGTGGGACAACTTTACCTCGTAAACCATCCTACTCTACCAATGACCTCTTTCGGTGCAGAAGAAAAGAGAAAGCCACGAGGAACAGGCGCATACTTCCCTAATATGAATTCTCGCCCATTCAGGGATAATAGGCCAATGCCAGGTAGGGGAAGGGGTCAAGCACCGGGTGCCCATGGGCATTTACAGAGATACCCTCATAACAATGGGTTTGCCCTAGCTTCACAAGAGTTAAATTTGCCTGTGGAAGGAAGTTTTGAACCTGCTGTAGAAGGATATCATGCTCTTAGCAATGGTAGAGCCAGATCTTCAGAAGCCTATTTCTCTCAACCTTCCACATGGGGAGCACGCCATGCTAATGGTTTTCCTCACTCATCTGACAAACATGAGTCTGGCTCTGTGAGCCCTCAGCTTCGTGGATCCCCAAGACCTGAAGTGAGCAATCACCCAGACACTGGCATTTCTACTTCTAGGGCATCTGTGCCTAACACGGGGATAGTGACAGAGGAGAGGTCTGATTCATTGTCTGTAGCGGATCCCAAAAGCATTATCTCTGGTGGAGTCCATGGCTATTCAAAATTGCCTTGA 2397 0.4293 MGDLHLNGVVFGEDRPYSSSPPSPPLPVLNPDPSVVMEEAWSAAEETTAEILRRIQPTLAADRRRREVVDYVQRLIRFGARCEVFPYGSVPLKTYLPDGDIDLTALSCQNIEDGLVSDVHAVLRGEENNEAAEYEVKDVRFIDAEVKLVKCLVQNIVVDISFNQLGGLSTLCFLEKVDRLVAKDHIFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHRFHMSLDGPLAVLYRFLDYFSKFDWDNYCVSLKGPVGKSSPPDVVADALENGGNTLLTDEFIRSCVESFSVPPRGIDLNLRAFPHKHLNIIDPLKENNNLGRSVNKGNFYRIRSAFKYGARKLGWILMLSEDRIADELNRFFANTLDRHGSNQGNEDNSFLCLSSGSKDMMTGNQHNYEIRNERERYVVKDVSSMSGPSFESSGDGNSVATYKLGEDSKNVATSEVLGIASTNGLPYCSNGKAEHITCSDTDVNSVFDDEKEKHGMVSNSVRSHTVEKNMASNGSTVENDLFHSDRYNPSVPGGHEASKSLLDLAGDYDSHIANLQYGQMCNGYPVSPVVVPSPPRSPKFHNRNPWETVRQCLQMNHGIHPQTNSNCVVGQLYLVNHPTLPMTSFGAEEKRKPRGTGAYFPNMNSRPFRDNRPMPGRGRGQAPGAHGHLQRYPHNNGFALASQELNLPVEGSFEPAVEGYHALSNGRARSSEAYFSQPSTWGARHANGFPHSSDKHESGSVSPQLRGSPRPEVSNHPDTGISTSRASVPNTGIVTEERSDSLSVADPKSIISGGVHGYSKLP* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2956 798 MobiDBLite consensus disorder prediction 726 798 - -
Tpr4g2956 798 Gene3D Beta Polymerase, domain 2 57 163 IPR043519 -
Tpr4g2956 798 MobiDBLite consensus disorder prediction 620 662 - -
Tpr4g2956 798 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 26 754 - -
Tpr4g2956 798 MobiDBLite consensus disorder prediction 729 774 - -
Tpr4g2956 798 CDD NT_PAP_TUTase 64 168 - -
Tpr4g2956 798 Gene3D - 164 364 - -
Tpr4g2956 798 SUPERFAMILY PAP/OAS1 substrate-binding domain 186 352 - -
Tpr4g2956 798 SUPERFAMILY Nucleotidyltransferase 39 205 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2956 Tpr-Chr4 33753087 33766183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2956 - - gmx:100814626 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2956 4 33753087 33766183 Tpr4g2956 4 33753087 33766183 ECH
Tpr4g2956 4 33753087 33766183 Tpr3g3025 3 32686381 32693028 ECH