Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3025 ATGGGTACTATACAAGGAAATTTGTTGCTGTCCTCCTCGCGTGACCAAACAATGATATCAATGGATGAGGAGCTTTGGTTTAAGGCTGAAGAGAGGGCACAGGAAATACTATGTATAGTTCAACCTAATGTTGTTTCTGAGGAGAACAGAAAGAAGATTATTGATTTTGTTAAGAGGCTCATTGGCGGCTACTATGGGGGAGAGGTGTTCGTGTTTGGATCAGTCCCACTGAAAACCTATCTTCCAGATGGAGATATTGACTTGACAGTTCTCTGTCATGAAAGTGTAGAGGAGGATTTGCCACAGGCAGTATGCAATCTACTAGGCAGTGGAGAGGACCTTGAATATAAAGTAAAAGACATACAACACATCCGTGCGCAGGTTAAGGTTGTGAAATGCACAGTGAAAAATATAGCAGTTGATATCTCTTTCAATCAGATGGCTGGACTCTATGCTCTGCGCTTTCTGGAGCAGGTTGACGAATTTGTCGGGAAAAACCATGTCTTCAAACGCAGTATAATCTTAGTCAAAGCTTGGTGCTATTATGAGAGCCGAATTCTTGGTGCACATCATGGCCTGCTGTCAACATATGCAGTTGAAATATTAGTTTTGTATATTATCAATTGTTTTCATTCATCATTGCACGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGATTGGGAGAAGAATTATGTCACCATAGATGGTCCACAAGCCTTATCCTCCCTTCCCGAAATTGTCGAGAAACCAGAATGTGATCGAGGTGGATTGTTGCTCAGTAAAGAGCTTCTTAAAAATTATAGGGATATGTGCTCGGTTCCAAAAGCATCTGAAACTTTTCCCCGTGAATTTTCCATCAAGTTCATGAACATTTTGGATCCTCTAAAAAATGACAACAATCTAGGCCGCAGTGTCAACAAAGGCAATTTACATCGAATTAGATTCGCTCTTACCTTCGGTGCTCGAAGGCTTGAGGAGATCCTTAAACTTCCAGGACAAAGCATGGGTGGAGCACTTGAGGTGTTTTTCATGAATACCTTGAATAGAAATGGGAAAGGACAAAGGCCAGATATTGATGTTCCCGTTCCTGCATTTGGTACTGGAAAATCTGAAGAGCCTGTCCTCGTTGGAGATTGTGACAACTACTATGGTGGCTTACAGTATGTTCAGTTATATCGTAATCATGCCATGCCGCTCCCTGCACATTCGAGTTCCCCATCAATACCATTTGATTCTGTTGCACATTCGAGTTCCCCATTGATACCATTTGATGCTGTTGCACATTCGAGTTCCTCATCATTACCATTTGACGCTGATTTGCTTGCGCTACAACAAAACTGGTATATGTATTATCATAGAGGGGCTGACTTATATGTCCCGAGACAGACATTCATTCCTCCAAATGCTCCTCCTCCTCCACCAACTTTTAGCCTTGAAGACATAGGGAAATCGCGAGGAACTGGCACATACATACCTAACATGACTCATAGTACCTACTGGAATTCCCGTGCAAGAAGTTCCAGGCCAAGGAGATTCGGTCCTGGGAATAATGGTCATGGGAATAATGGTCCTGGGAATAATGGTCATGGGAATGGTCAAAACAATAATAATACTAACAATAATAATGCATCGTCCGAATCATCCGAGAGAAAGCAAATAGAAGAGGTTCTTCCTGAGACTGATATGGATGATGATGATGATGATAATAATAATAATTCCAAGTCTTTTGAGCTCTCAAATGATGATTTTCCTATTCTCAAATGCATTGGCAACACCAGCTCCTCAGCATCCCAAAAATCTGAGCAGGACCAGAAATCGGCACCGCCTCAAATAATTATTGAGTTCGGAACTTACAGTAGCTCGCAACCACTGACAAAGCTGAGCTTGGGAACAAAAGATCAGAAAGGGGATTCTAGTGTTTCATCCTCTCAAGGCGCTGCACCAGTTGTTCCAAGTCTTGCAGGGAAGGCGAAAGAGAAATGTACTCGGATCGAAGAGAAGATGAATTGA 2028 0.4221 MGTIQGNLLLSSSRDQTMISMDEELWFKAEERAQEILCIVQPNVVSEENRKKIIDFVKRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLCHESVEEDLPQAVCNLLGSGEDLEYKVKDIQHIRAQVKVVKCTVKNIAVDISFNQMAGLYALRFLEQVDEFVGKNHVFKRSIILVKAWCYYESRILGAHHGLLSTYAVEILVLYIINCFHSSLHGPLEVLYRFLDYYSTFDWEKNYVTIDGPQALSSLPEIVEKPECDRGGLLLSKELLKNYRDMCSVPKASETFPREFSIKFMNILDPLKNDNNLGRSVNKGNLHRIRFALTFGARRLEEILKLPGQSMGGALEVFFMNTLNRNGKGQRPDIDVPVPAFGTGKSEEPVLVGDCDNYYGGLQYVQLYRNHAMPLPAHSSSPSIPFDSVAHSSSPLIPFDAVAHSSSSSLPFDADLLALQQNWYMYYHRGADLYVPRQTFIPPNAPPPPPTFSLEDIGKSRGTGTYIPNMTHSTYWNSRARSSRPRRFGPGNNGHGNNGPGNNGHGNGQNNNNTNNNNASSESSERKQIEEVLPETDMDDDDDDNNNNSKSFELSNDDFPILKCIGNTSSSASQKSEQDQKSAPPQIIIEFGTYSSSQPLTKLSLGTKDQKGDSSVSSSQGAAPVVPSLAGKAKEKCTRIEEKMN* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3025 675 Pfam Nucleotidyltransferase domain 51 132 IPR002934 GO:0016779
Tpr3g3025 675 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 654 - -
Tpr3g3025 675 Gene3D - 212 336 - -
Tpr3g3025 675 MobiDBLite consensus disorder prediction 622 654 - -
Tpr3g3025 675 MobiDBLite consensus disorder prediction 494 513 - -
Tpr3g3025 675 CDD NT_PAP_TUTase 49 156 - -
Tpr3g3025 675 SUPERFAMILY PAP/OAS1 substrate-binding domain 168 334 - -
Tpr3g3025 675 MobiDBLite consensus disorder prediction 494 511 - -
Tpr3g3025 675 SUPERFAMILY Nucleotidyltransferase 20 187 IPR043519 -
Tpr3g3025 675 MobiDBLite consensus disorder prediction 622 675 - -
Tpr3g3025 675 Gene3D Beta Polymerase, domain 2 30 166 IPR043519 -
Tpr3g3025 675 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3025 Tpr-Chr3 32686381 32693028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3025 - - aip:107623369 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2956 4 33753087 33766183 Tpr3g3025 3 32686381 32693028 ECH
Tpr3g3025 3 32686381 32693028 Tpr3g3025 3 32686381 32693028 ECH