Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2703 ATGGGTAGCTATAGAGTCTGCTTGTGTTTCCGGCGGAGGTTTAAGTCAGGGGAGGCGGTTGCGCCACAGGAGGTTCGGGAGCTGTTTAACGAGTATGCTGAAGGTGGGGCTCATATGACTTCTGATCAGCTCAGCCGGTTTCTGGCGGAGGTTCAAGGCGAGGTTTATGAGAAGGATGAACTCGACACACAGAAGGTGGTTGAGGAAGTGTTGCAAAAGCGGCATCATATTACGAAGTTCGCAAGGCATAATCTTACGCTAGATGATTTTCATCATTACCTGTTTTCTACTGAATTGAATTCCCCTATCAGATCTCAGGTTCATCAGGATATGACAGCTCCATTGTCCCATTATTTCATATATACTGGCCATAACTCTTACCTAACAGGAAATCAACTCAGCAGTGATTGTAGTGATGTTCCTATTATAAAGGCATTGAAAAGAGGTGTAAGAGTTGTTGAGCTTGATATATGGCCTAATTCCAACAAAGATGATGTTATTGTTCTACATGGAAGGACATTGACAACACCTGTGGATTTGATCAAATGTTTGAAATCGATTAAAGAACATGCTTTTTCGGCATCTCCCTATCCGGTCATAATAACGCTGGAAGACCATCTTACATCAGACCTTCAAGCAAAAGCTGCTCAGATGATAACTAAAACATTTGGAGATATGCTATTCTGTCCAAATGACGAAAGCTTAAACAATGTTCCGTCACCTGAAGAACTGAAGTACAAGATCATGATATCAACAAAACCTCCAAAAGAGTACTTAAATTCTAAGAGTGTGAGGGAGAATTCAAAACAATTGCTGAAATCCAAATCGAAGGATTCTGATGAAGATGAATGGGGAAAAGTAGTCAACGATGTTGTTAATACACAAAATGAAGATGATAAGGGTGATTTTGAGTCAAATCAACACAATGATGATGATGATGAATCAAATGATGATGAATATGAAACAAATCAGGAGAGTGAATATAAGCGTCTAATCGCTATTCGTGCTGGAAAACCTAAGGGTAGTCTTAAGGAAGCCTTAAAAGTTGAAGATGATAAAGTGAGACGCCTTAGCTTAAGCGAACAACAGATTGAAAAGGCTTCTGAGTCGCTCGGAACTGATCTTATCAGATTCACCCAGAAAAACTTTTTGAGGATATATCCGAAGGGTACACGGGTGACCTCGTCCAACTACAAGCCATTTGTTAGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAAGGTTATGGAAGAAATCTTTGGTTGATGCATGGAATGTTTAGATCCAATGGAGGATGTGGTTATGTGAAAAAGCCAGATTTTCTTATGAATGTAGGTCCTAATAATGAGGTATTCAATCCTAAAGTTAAGTTGGAAGTGAAGAAGACTCTTAAGGTGAAAATATATGGGGGAGATGGATGGAGTATGGATTTCAAACAAACTCACTTTGACTTATATTCTCCGCCAGATTTTTATGTCAGGGTTGGCATAGCTGGAGTACCAGCTGATGTAACAACGAAGAAAACAAAGATAATAGAAGATAATTGGACACCAACTTGGGAAGAAGAGTTTAAATTCCCTTTAACCGTACCGGAACTGGCTTTGCTTAGAGTGGAAGTGCATGAATATGACATGTCTGAGACAGATGATTTTGGAGGCCAAACTTGTTTACCAATCGCTGAACTGAAACAAGGGATTCGCGCTGTTCCACTCTACGACCGAAAAGGAGAAAAGTACAACTCAGTTAGGCTTCTTATGCGATTCGATTTTATTTAA 1782 0.3996 MGSYRVCLCFRRRFKSGEAVAPQEVRELFNEYAEGGAHMTSDQLSRFLAEVQGEVYEKDELDTQKVVEEVLQKRHHITKFARHNLTLDDFHHYLFSTELNSPIRSQVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALKRGVRVVELDIWPNSNKDDVIVLHGRTLTTPVDLIKCLKSIKEHAFSASPYPVIITLEDHLTSDLQAKAAQMITKTFGDMLFCPNDESLNNVPSPEELKYKIMISTKPPKEYLNSKSVRENSKQLLKSKSKDSDEDEWGKVVNDVVNTQNEDDKGDFESNQHNDDDDESNDDEYETNQESEYKRLIAIRAGKPKGSLKEALKVEDDKVRRLSLSEQQIEKASESLGTDLIRFTQKNFLRIYPKGTRVTSSNYKPFVSWMHGAQMVAFNMQGYGRNLWLMHGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKVKLEVKKTLKVKIYGGDGWSMDFKQTHFDLYSPPDFYVRVGIAGVPADVTTKKTKIIEDNWTPTWEEEFKFPLTVPELALLRVEVHEYDMSETDDFGGQTCLPIAELKQGIRAVPLYDRKGEKYNSVRLLMRFDFI* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2703 593 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 458 IPR017946 GO:0006629|GO:0008081
Tpr4g2703 593 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 3 592 IPR001192 GO:0035556
Tpr4g2703 593 Gene3D C2 domain 459 593 IPR035892 -
Tpr4g2703 593 SMART plcy_3 328 445 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2703 593 Pfam Phosphoinositide-specific phospholipase C, efhand-like 23 99 IPR015359 -
Tpr4g2703 593 MobiDBLite consensus disorder prediction 259 307 - -
Tpr4g2703 593 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 356 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2703 593 CDD C2_PLC_like 463 592 - -
Tpr4g2703 593 SUPERFAMILY EF-hand 10 111 IPR011992 -
Tpr4g2703 593 SMART plcx_3 109 253 IPR000909 -
Tpr4g2703 593 PRINTS Phospholipase C signature 114 132 IPR001192 GO:0035556
Tpr4g2703 593 PRINTS Phospholipase C signature 140 160 IPR001192 GO:0035556
Tpr4g2703 593 PRINTS Phospholipase C signature 237 254 IPR001192 GO:0035556
Tpr4g2703 593 PRINTS Phospholipase C signature 383 404 IPR001192 GO:0035556
Tpr4g2703 593 PRINTS Phospholipase C signature 404 422 IPR001192 GO:0035556
Tpr4g2703 593 PRINTS Phospholipase C signature 559 569 IPR001192 GO:0035556
Tpr4g2703 593 ProSiteProfiles C2 domain profile. 439 575 IPR000008 -
Tpr4g2703 593 SUPERFAMILY PLC-like phosphodiesterases 109 446 IPR017946 GO:0006629|GO:0008081
Tpr4g2703 593 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 3 592 - -
Tpr4g2703 593 SMART C2_3c 465 573 IPR000008 -
Tpr4g2703 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 109 253 - -
Tpr4g2703 593 CDD PI-PLCc_plant 108 432 - -
Tpr4g2703 593 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 358 444 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Tpr4g2703 593 MobiDBLite consensus disorder prediction 259 324 - -
Tpr4g2703 593 Gene3D - 20 105 - -
Tpr4g2703 593 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 465 592 IPR035892 -
Tpr4g2703 593 Pfam Phosphatidylinositol-specific phospholipase C, X domain 111 253 IPR000909 -
Tpr4g2703 593 Pfam C2 domain 465 567 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2703 Tpr-Chr4 30035118 30039748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2703 1 593 Acyl Lipid Metabolism Gene Families AT5G58700 63.423 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2703 K05857 - cit:102623592 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2703 4 30035118 30039748 Tpr4g2703 4 30035118 30039748 ECH
Tpr4g2703 4 30035118 30039748 Tpr7g0950 7 8745037 8749214 ECH
Tpr4g2703 4 30035118 30039748 Tpr4g2384 4 25345692 25350227 ECH