Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2529 ATGTTACAAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCTAGCCACATTAGAACAAAGCAATCAAAATGGTTGGATCAATGTCTCCAAGATATGGAGGAGAAGGTGACTGACACATTAAGAGTCTTACAAAATGAAGGAGACTCATTTTCACAAAGAGCAGAAATGTATTACAGAAAAAGGCCAGAGCTTGTTGAATTTGTTGAAGAAGCCTTTAGAGCATATAAAGCCTTAGCAGAAAGATATGATCATTTATCAAGAGAACTTCAAAGTGCAAATAGAACAATTGCAAGTGTCTTCCCTGATCAAGTTCCATGCCAAATCGATGATGACGAAGACGACGAAAGTGACACAGGAACAATCCCACCATCTCCTGACCACAACAGCCAATTTCAGAAATCACCAACTATTCCAAAAGTTCCAAAGATTCCAAAGAAAGATTTTCGAAGTCCTTCGATGTTGTTATCGCGAAAAGGTCCAACAATTAAGAGAAGTCCTTCTGTTTACGTTCCTGCTCAAAGATCAGGTCTTACCAAAGCTGAAGCATTAGGTGAAATCGACAAACTTCAGAAAGAGATTTTAGCGTTGCAGACCGAGAAAGAGTTTGTGAGAAGCGTGTACGAGCGTGCATACGAAAAGTACTGGGAAATCGAAGATCATATAACAGGTACGCAGAAAAGTGTTTGCAGTTTGCAAGATGAATTCGGTGTCGGTACTGTCATTGAAGACGATGATGCTAGAGCCTTAATGGCAGCAACGGCATTGAAATCGTGTCAAGAGACACTTTCAAAGCTTCAAAAGATTCAAGCACAATCATCCATAGAAGCGAAAGTTGAATATGAAAGGGTTAGAAAAGCTCATGAGATGTTTGAGAGTCTTAGAGATCAATTTATCAGTAAATTCATGCATCAAGAAGAACATGAACATGTCGAAAAATGTAAGAGCATAATAAGTGAAGAACAGAAACACATTGATGAAGAGATAGCTAGTTTGGAACAACAAGAGAACGACGTTGTTTTGTTGAGAGAAACTATTAAAGAAAAATTGGCACAAGATTCTGCAAACTCTCTTACCGTCACCGAAATGGCCGAATGCATCGATGAGCTTGTGAACAAGGTTGTTACATTGGAAACCGCGGTGTCTTCTCAAACTGGTATGGTTAATCGATTGAGATCAGAAACCAATGAACTTCAAACAAATATAAAGAAATTAGAAGAGGACAAGGAAATTCTTAAAGCAGGAGCAGAAGCTACTAATAAGAAGCTAAAAGAATTTGAAGAGGAATTGTTGAGAGTGAAGATTCTTAACAAAAGTGTTAAATCACAAGATAATAGCCTCCGAACACATTTTACCGAAGCTAGTTGTAATATTGAGCATTTATCCGGAAAGTTAAATAATATGAAACATGATGTGGATGATGTGAATTTAGTACTTTACAAGAAGAAGAAAACTAATTCTGATGTTGATGATTCTATTATGAAGGATGTTAATACAATAGACAAAAGTGGCGGTGCAAATTTGGATGCTAAGAACTCTATTATGAGTCAAAATACTAATTTTATTACTGAAAGGATTGAAAAAATGGGACAACATGAGAAAGATGATTTGTCTGATACAGTTAGCAATCTTGAAATTGAATCACATGATTTGGAGACAGGTGAGGGTGATCAACCAAATTGGAGGCAAATGTTTTTGAGTGGTTTGGACGATAGAGAGAAAATTCTGTTGGAGGAGTATACATCTGTTTTGAGAAACTATAAAGATGTTAGAGTGAAGCTTAATGATGTTGAAAAGAAAAATAGGGACAGCATTTTTGAGTTAGCACTTGAGTTAAGGGAAATGAAGAGTGCTCTTGTGACAAAGGACAAAGAGATACAATTTTTAAATCAAAAGATAAATTGTCCAGACTCAAATCCAGATGAAAGTCCATACACAACAGCAACAGAATACAAATACACACCGAATGAAGCACTTTTGAGAAAATCGGGTCAAGGATCCAACATACAGGAGATAGATATTTCATCTCTAACAACATCTTATGCAGACCAACATAATCAAAAGTCACCAACCCTTGGCCTCAAAATGACCCTTGAGAAGCTCATGGCAGACCAAGACAAGCGGCACACCCTTTCGGATTTAGAAAAGAAATTCCGTTCGGACATCGACGACCTCCTCGAAGAAAATCTTGAGTTTTGGCTAAGATTTAGCACCTCAGTTCATCAAATTCAAAAGTTTCAAAACTCAATTCAGGACTTAAAAGCAGAACTGAAGACAATAAAGGAAAACAACAAATCCGAAGGACATTCCCATTCAAAACATCATCAATCTGCACAATCTCAACTTAGGCCGATTTTCCGACATTTAAGAGAGATTAGAACTGAGTTATCTCTTTGGCTTGAACACAATGCAGTGTTACAGGATGAACTACAAGGTAGATATTCATCATTATGCAACATTCAAGATGAAATTGCAAGAGCAGCTGTTAAAAATGCACAACCTAATGGTGAAAAAGTTGGTGAGATAATAAGTGGTTATCAAGCTGCAAAGTTTCAAGGTGAGATTCTTAACATGAAACAAGAAAATAGTAAAGTTGCAAGTGAATTACAAGCTGGTCTTAGTCTTGTGAAAGGAATGAAAATTGATGTTGACAAGACACTTGATGAACTTGATCAAGATATTGGGATTAGTAGTGTTCATAGTGACACAACAAAAAAGAGCACATCATCAAAAGGTACTAGAATACCTTTGAGGTCTTTCTTGTTTGGTGTTAAATTAAAGAGACAAAAGCATCATCAATCATCATCATCAGTATCATCAGCATCATCACTGTTTGCTTGTGTCAATCCTGCACTGAATAAACAATATAGTATCAATGAACATGCACCAGCTCCAATAGAGAGAGAGGAGGAGGATGATATTTGA 2925 0.3692 MLQRAASNAYSWWWASHIRTKQSKWLDQCLQDMEEKVTDTLRVLQNEGDSFSQRAEMYYRKRPELVEFVEEAFRAYKALAERYDHLSRELQSANRTIASVFPDQVPCQIDDDEDDESDTGTIPPSPDHNSQFQKSPTIPKVPKIPKKDFRSPSMLLSRKGPTIKRSPSVYVPAQRSGLTKAEALGEIDKLQKEILALQTEKEFVRSVYERAYEKYWEIEDHITGTQKSVCSLQDEFGVGTVIEDDDARALMAATALKSCQETLSKLQKIQAQSSIEAKVEYERVRKAHEMFESLRDQFISKFMHQEEHEHVEKCKSIISEEQKHIDEEIASLEQQENDVVLLRETIKEKLAQDSANSLTVTEMAECIDELVNKVVTLETAVSSQTGMVNRLRSETNELQTNIKKLEEDKEILKAGAEATNKKLKEFEEELLRVKILNKSVKSQDNSLRTHFTEASCNIEHLSGKLNNMKHDVDDVNLVLYKKKKTNSDVDDSIMKDVNTIDKSGGANLDAKNSIMSQNTNFITERIEKMGQHEKDDLSDTVSNLEIESHDLETGEGDQPNWRQMFLSGLDDREKILLEEYTSVLRNYKDVRVKLNDVEKKNRDSIFELALELREMKSALVTKDKEIQFLNQKINCPDSNPDESPYTTATEYKYTPNEALLRKSGQGSNIQEIDISSLTTSYADQHNQKSPTLGLKMTLEKLMADQDKRHTLSDLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIKENNKSEGHSHSKHHQSAQSQLRPIFRHLREIRTELSLWLEHNAVLQDELQGRYSSLCNIQDEIARAAVKNAQPNGEKVGEIISGYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKIDVDKTLDELDQDIGISSVHSDTTKKSTSSKGTRIPLRSFLFGVKLKRQKHHQSSSSVSSASSLFACVNPALNKQYSINEHAPAPIEREEEDDI* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2529 974 Coils Coil 612 632 - -
Tpr4g2529 974 Coils Coil 743 763 - -
Tpr4g2529 974 Coils Coil 388 443 - -
Tpr4g2529 974 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Tpr4g2529 974 MobiDBLite consensus disorder prediction 106 148 - -
Tpr4g2529 974 MobiDBLite consensus disorder prediction 122 137 - -
Tpr4g2529 974 Coils Coil 180 207 - -
Tpr4g2529 974 Coils Coil 318 352 - -
Tpr4g2529 974 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Tpr4g2529 974 PANTHER PROTEIN NETWORKED 2A 1 957 - -
Tpr4g2529 974 Coils Coil 69 96 - -
Tpr4g2529 974 PANTHER PROTEIN NETWORKED 2D 1 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2529 Tpr-Chr4 27456098 27460759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2529 - - mtr:MTR_5g066340 1520.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2529 4 27456098 27460759 Tpr4g2529 4 27456098 27460759 ECH
Tpr4g2529 4 27456098 27460759 Tpr3g3382 3 37323122 37326072 PCT