Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3382 CATGCAAACAAATGCTTAACAGATATGGAGGAGATAGTGGCCGAGACCCTCAAAATAATTGACAACAGTGGGGACTCGTTTGCCCAAAGGGCAGAAATGTACTACAGGAAGAGACCAGAACTCATAAATTTTGTGGAAGAAGCCTTTAGAGCATTTAGAGCACTAGCAGAGAAATATGATCATCTATCAAAGGAGCTACAAAGTGCGAACCGAACAATTGCCACTGCTTTCCCCGAACAAGTCCGTTACAGAATAGATGAGGATGAAGATGAAGAAAGTTTCCCTGAAACTAATTCATCAATTCCAAACCCTAATAACCAAACAGAAAATCAAGGCAACATTCCTAAACCTCCGAGTATCCCGAAGAAACATAATCGAACTCCATCTATGTTGCTCTCAAAAAAAGCAACACATAGGAGAAGTGGCAGTGCTGCAAAATCTTTTTCAAATTCAATAGTTCTAAGTTCCGGTTTGAGCAAGGTTGAAGCATTAGCCGAAATAGACAAACTTCAGAAAGATATTTTGGCATTGCAGACTGAAAAAGAGTTTGTAAGGAGCTTGTATGAAAATTCATATGAAAAGTATTGGGAAATTGAAGACAAAATTACAGGAATGCAAAAAAGAGTTTGCAGTTTGCAAGATGAGTTTAGTATTAGTACAGTTATTGAAGATAATGATGCAAGAGCTTTAATGGCAGCCACGGCGTTAAATTCATGTAAAGAAACCCTAGATAAGTTGAAAGAGGTTCAAGTACAATCATCCGAGGAAGCTAAAGAAGCATTCCAAAAGTTTAAGGAAGCTCATCACAAATTTGAAAACCTTAGAAGTAACTTGGTTTCCAAGCAAACAAATCAGCGAGATGAGGAAACAGATTCAAAAAGTAAAGATGAAGAAGAGATAGAACTTAGCTTGGAAGAAAATATGCACGTGCATGATGACTTAGCGTCGTTGCAAGAGAGGATTAAGGAAAAGCTTGAGGAAGGTTCGGGAGATTCGCTTACGATGACAGAAATTGCAGAGATGATTGATGAGCTTGTAAGTAAGGTTGTTAGTTTGGAAACGGCGGTTACTTCTCAGAATTCATTGGTAAAGAGACTGAAATCAGAAGCTGATGAACTTCAAACAAATATACAAAGTTTAGAAGCGGACAAGGAAATTCTTATTGAAGATTCAGAAAATAGTTGCAAGAGGATGAAAGAATTGGAAGAGGAGTTGAAGAGAGTTAAAGCTCTCAACAAAAGTGTCGAAATGCAAGATAAGAATCTCCAAACAAACATTCATGAAGCTAGTTTTAATCTTGAACATCTTTCAGGAAGATTGAAAAATGTGAAGCTAGATGAGGAAGGGGATAATTTGGTCCTTTCCAATTCCGAGAATACAGTTTTTTTTGATGGAAAACTAAGTGAGAATTTTGAAAAACATGATGATAAGTCTAGTTTGAAGGAAAATATTGATTTTAGGACTGAAGTGACGCCGGAGCTAACACAACAGGATAAGGTTGAATCACTTGATGTTGAAACTGGGGAGGAAAAAGATCAAACTAACTTGAATCAGATGTTTGTAAGTGGATCAGATGACAGAGAAAAAATTATGTTGGACGAGTACACGTCGGTTTTAAAGAACTATAACGATGTAAATGACAAGCTCAACGATACGGAGAACAAAAATCGGAACAGCATTTTCGAATTGGCACTTCAGGTGAGGGAATTGAAGGATGTAGTTGCCACTAAGGATGAAGAGATAAACATTTTACAAAGGAAGCTTACCTTTAAAGAAAGAAATCCGGATGAAAGTCCTCGTACCACTTTAAATGAGGAAGCGCCTCTTGAAAACGCCTCTTCAGATATAGGTAGCACTTCTTTTGGAAACACGGGAAATAATGACACAAGGACAAGATTAATTTTGGTGAGAGAAAAACAAAGTTACAAGAACCGTTCCCTTTCACCTCTAGAAAAGAAATTCCGTTCTGAAATCGATGATTTGCTCGAGGAGAATTTAGAGTTCTGGTTGAGGTTCAGCACTTCAGTTCATCAGATTCAAAAGTTCCAAGAATCTTTAGAGGACTTAAAAGCAGAACTAAGAATAATAAAGCATAATAACCTTGTGTCAGAAAACAAGATGTCATCCAAAGCTATAAAATCAGAAATAAAGCCAATATTTAGACATTTGAGAGAAATAAGAACCGAGTTATCATTATGGCTAGAACACAATGAAGTGTTGCAAGATGAGTTACTAGCTAGACATCCATCATTATGCAGCTTACAAGATGAAATAGCAAGTGCGGCGAATCCAGATTCATCGTCGAGCAACGGTGAACTTAGTGAGCATCAGGCTGCAAAGTTTCAAGGTGAAGTTCTCAACATGAAACAAGAAAGCAACAAGGTTTCTAGCGAACTGGAAGAAGGTTTGAGTTATGTAAAAGAACTTAAAATTGAAGTTGAGAAAATACTCGACGAATTGAGTCAAACAATGGGAGATAACAATAATGATATGAAACAATCCACAAGCCGCGCTAAATTACCTTTAAAGTCTTTCTTATTTGGAATCAGGTTAAAGAAGCAAAAACAATCAATGTTTGCATGTGTCACTCCAACATTACAGAAACAATACAGTGATCTAGAAGAAGCTGATGATGCCCCAATATAG 2646 0.3707 HANKCLTDMEEIVAETLKIIDNSGDSFAQRAEMYYRKRPELINFVEEAFRAFRALAEKYDHLSKELQSANRTIATAFPEQVRYRIDEDEDEESFPETNSSIPNPNNQTENQGNIPKPPSIPKKHNRTPSMLLSKKATHRRSGSAAKSFSNSIVLSSGLSKVEALAEIDKLQKDILALQTEKEFVRSLYENSYEKYWEIEDKITGMQKRVCSLQDEFSISTVIEDNDARALMAATALNSCKETLDKLKEVQVQSSEEAKEAFQKFKEAHHKFENLRSNLVSKQTNQRDEETDSKSKDEEEIELSLEENMHVHDDLASLQERIKEKLEEGSGDSLTMTEIAEMIDELVSKVVSLETAVTSQNSLVKRLKSEADELQTNIQSLEADKEILIEDSENSCKRMKELEEELKRVKALNKSVEMQDKNLQTNIHEASFNLEHLSGRLKNVKLDEEGDNLVLSNSENTVFFDGKLSENFEKHDDKSSLKENIDFRTEVTPELTQQDKVESLDVETGEEKDQTNLNQMFVSGSDDREKIMLDEYTSVLKNYNDVNDKLNDTENKNRNSIFELALQVRELKDVVATKDEEINILQRKLTFKERNPDESPRTTLNEEAPLENASSDIGSTSFGNTGNNDTRTRLILVREKQSYKNRSLSPLEKKFRSEIDDLLEENLEFWLRFSTSVHQIQKFQESLEDLKAELRIIKHNNLVSENKMSSKAIKSEIKPIFRHLREIRTELSLWLEHNEVLQDELLARHPSLCSLQDEIASAANPDSSSSNGELSEHQAAKFQGEVLNMKQESNKVSSELEEGLSYVKELKIEVEKILDELSQTMGDNNNDMKQSTSRAKLPLKSFLFGIRLKKQKQSMFACVTPTLQKQYSDLEEADDAPI* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3382 881 PANTHER PROTEIN NETWORKED 2A 3 873 - -
Tpr3g3382 881 Coils Coil 532 552 - -
Tpr3g3382 881 Coils Coil 356 421 - -
Tpr3g3382 881 MobiDBLite consensus disorder prediction 604 623 - -
Tpr3g3382 881 Coils Coil 52 72 - -
Tpr3g3382 881 MobiDBLite consensus disorder prediction 96 115 - -
Tpr3g3382 881 MobiDBLite consensus disorder prediction 592 623 - -
Tpr3g3382 881 Coils Coil 679 706 - -
Tpr3g3382 881 Pfam KIP1-like protein 4 60 IPR011684 GO:0003779
Tpr3g3382 881 MobiDBLite consensus disorder prediction 275 299 - -
Tpr3g3382 881 MobiDBLite consensus disorder prediction 87 128 - -
Tpr3g3382 881 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 66 IPR011684 GO:0003779
Tpr3g3382 881 Coils Coil 806 826 - -
Tpr3g3382 881 Coils Coil 160 187 - -
Tpr3g3382 881 PANTHER PROTEIN NETWORKED 2D 3 873 - -
Tpr3g3382 881 Coils Coil 567 587 - -
Tpr3g3382 881 MobiDBLite consensus disorder prediction 282 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3382 Tpr-Chr3 37323122 37326072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3382 - - gmx:100805236 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3382 3 37323122 37326072 Tpr3g3382 3 37323122 37326072 ECH
Tpr4g2529 4 27456098 27460759 Tpr3g3382 3 37323122 37326072 PCT