Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2446 ATGGCACATTTAAGGGGTCTATTAGATGGAGTTGAAGAACATTATGGATTAATGTCTTTTGGTACCAAAGACATTTTTCATATACGACGTAAAATAAGATTTTGGCAAAGGAAGTTCAAGAGAAGATATTTATTTGGGGGATTAGTGGTTCTTATTTTTATATGTGTGCTTATCAAGTTTATATTGTTGAACATGTTTTTTTGTCAGCTAGATTTGCATCCTATAAATCATTCAAACGTTGTGGAAGATCATGAACCTTCACCAAAGAATTTGTCGACTCTCGAAATTTGGAAGCATCCTAACAGTGACAATTACTACAACTGCATGGGACGAGAAAAGCATGATAGACGTGCGTCCAAATTAAGCTCTTTATTGCTCAATTAATTTGAGTAAAAATTCGATATAAGTGATTCTCAATACTCTGCCATTCATCTTTGTATAACTAGGAAGAATTTCTATTATACAGGTAATGGAAGCACCACAAATGGCTATCTTTTGATTCACGCCAATGGAGGATTAAATCAAATGAAAACCGGAATAAGTGACATGGTTGCAATTGCAAAAATTATGAATGCCACTCTTGTTTTACCTACATTAGATCACAATTCCTATTGGAAAGATCCCAGTGATTTTAAAGAAATTTTTAATTGGAAGAACTTCTTTGAAGTCTTAAATGAAGATGTTCAAATAGTGGAGTCTCTACCACCCAAATTTGCAGCAATTAAGCCAGCTTTGAAGGCCCCTGTTTCTTGGTCCAAGGCCGGTTATTATAGCAGGGATATTGTGCATTTATTGAAGAAACACAAAGTAGTCAAGTTTACTCATACTGATTCTCGCCTAGCCAATAATGGTCTACCTAGTTCAATTCAGAGAGTGCGTTGTCGCGCCATGTACCAGGCGCTTAGGTTCGCAAGCCCAATTGAAGAGCTTGGAAAGAAGTTGGTCAATAGAATTAGAAACAACAACACCTCTTATATTGCTCTCCATTTAAGATATGAAAAGGACATGCTTGCATTCACAGGCTGCAGTCACAACCTAACAAAAGAAGAAACACAAGAACTAAAAAAAATGAGATATCAAGTGAAACATTGGAAAGAAAAAAATATTGATGGAAAATCAAAGAGATTAAAGGGTGGTTGTCCTATGACACCAAGAGAAGTTGCTGTTTTCCTTGAAGCACTTGGTTATCCACTTGATACAAAAATTTATGTAGCAGCAGGACTTATTTATGGCTTAGAAGGAATGCAACCACTACAAAATAAGTTTCCTAATTTGATATGGCACTCAACTTTGGCCACAAAACAAGAATTGCAACCCTTTGAAGGACACCTAAATCAACTTGCTGCTCTTGATTACTACATAACTGTTCAAAGTGATGTTTTTGTTTATAGCTATGATGGGAATATGGCTAAAGTTGCTAGGGGGCATAGAAAATTTGATGGATTCAAAAAGACCATTAATCCTGATAAGAATAATTTTGTTAGACTAATTGATCAATTGGACAATGGTCTAATTTCATGGGATGATTTCTCAGCAAAGGTTAAGGGTATACATGCAAACAATATTGGAGCACCTCAAGCTAGAAGAATTAAGCGCCATCCTAAATTAGAAGAGAGCTTTTATGCTAACCCTTTTCCAGGTTGCATTTGTCAGAAGCCAACAAACATGATGGTAAAAACAAGTCATGAATCATTATGA 1698 0.3563 MAHLRGLLDGVEEHYGLMSFGTKDIFHIRRKIRFWQRKFKRRYLFGGLVVLIFICVLIKFILLNMFFCQLDLHPINHSNVVEDHEPSPKNLSTLEIWKHPNSDNYYNCMGREKHDRRASKLSSLLLN*FE*KFDISDSQYSAIHLCITRKNFYYTGNGSTTNGYLLIHANGGLNQMKTGISDMVAIAKIMNATLVLPTLDHNSYWKDPSDFKEIFNWKNFFEVLNEDVQIVESLPPKFAAIKPALKAPVSWSKAGYYSRDIVHLLKKHKVVKFTHTDSRLANNGLPSSIQRVRCRAMYQALRFASPIEELGKKLVNRIRNNNTSYIALHLRYEKDMLAFTGCSHNLTKEETQELKKMRYQVKHWKEKNIDGKSKRLKGGCPMTPREVAVFLEALGYPLDTKIYVAAGLIYGLEGMQPLQNKFPNLIWHSTLATKQELQPFEGHLNQLAALDYYITVQSDVFVYSYDGNMAKVARGHRKFDGFKKTINPDKNNFVRLIDQLDNGLISWDDFSAKVKGIHANNIGAPQARRIKRHPKLEESFYANPFPGCICQKPTNMMVKTSHESL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2446 563 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 30 119 - -
Tpr4g2446 563 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 142 555 - -
Tpr4g2446 563 Pfam GDP-fucose protein O-fucosyltransferase 162 477 IPR019378 -
Tpr4g2446 563 PANTHER OS02G0726500 PROTEIN-RELATED 30 119 - -
Tpr4g2446 563 PIRSF UCP009360 17 551 IPR024709 -
Tpr4g2446 563 PANTHER OS02G0726500 PROTEIN-RELATED 142 555 - -
Tpr4g2446 563 CDD O-FucT_plant 162 483 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2446 Tpr-Chr4 26183672 26189025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g2446 79 562 Miscellaneous Gene Families AT2G37980 58.264 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2446 - - lang:109356771 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2446 4 26183672 26189025 Tpr3g3340 3 36807183 36811906 PCT