Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3340 ATGAGCACTCCGAGAGTACGAGGGAGAAAAATAAGTATAAACTTATTAGGTGAATTCAGTGACAGTGCATCATTATCATCATCATCACCAAAAGGCTTAATGCAGAAACGTAGAAATGTTCCATTGATCATTCTACTAAGGAGATTCCTTGGTGCAACCGTTTTTTCAATAGCTATAACTTGTTTCTTCTTTGTTCATGTTCATGTATCCACCACTTCTCCAACTGATCATAATCAATTCAATGAAAAGATTCATACGTCTCGTGACCTGCAAAGCTGGACTCGAGAGCTAGCTCCGCCCCATTTATCTAAGACTTCACCCTCTACTCCTAAGTTAAATGATTCAAGAGAGGATCCAGATTATGAGAAACTGTGGAAGCCACCACCAAATCATGGGTTTCTACCCTGCACAAAGCCTACCCCTAATTACACAACTCCTGAGAATACGCGAGGTTACCTTCTAGTTCATACAAATGGTGGACTCAACCAAATGCGAACCGGGATATGTGATATGGTAGCTATAGCTCGCATGATAAACGCCACCCTTGTAATTCCAGAACTTGATAAGAAGTCATTTTGGCATGATAACAGTAATTTCTCTGATATCTTTGATGAAAAGAGGTTTATTAGTTCTCTTGCCAATGATATAAAAATCATTAAGAAACTTCCTAAGGATCTGGCTAATGAAACCAAAATGGTGAAGCAATTCAAAAGCTGGTCTGGTATGGATTACTATCAGAATGAGATTGCCACCCTTTGGGATTATTTCGAAGTTATTAAAGCTTCCAAATCCGATTCTCGATTAGCAAATAACAATCTACCACCGGATATTCAAAAACTTCGCTGTCGCACTTGTTATGAAGCCCTTCGTTTCTCTCCTCGCATTGAACAGATGGGAAAAATATTGGTGGAGAGAATGAGATCATTTGGTCCTTATATTGCATTACACTTACGTTACGAGAAGGATATGCTTGCATTTAGCGGATGCACACACGGTTTATCTACTTCAGAGGCTGAAGAACTACGGATTATCAGAGAGAATACTAATTATTGGAAAAGAAAGCACATTGATCCAAATGAAGAGAGGTCTAAAGGGTTTTGTCCCTTAACTCCAAAGGAAGTTGGAATTTTCCTTAGTGCTCTTGGATACCCTAGAAAGACTCCAATATATATTGCTGCAGGGGAGATATATGGAGGCGAGTCGCATATGACTGAATTGCTATCGCGGTATCCATTTTTAATGAGCAAGGAAAAGTTGGCATCCGTTGCGGAGCTTGAACCATTTTCTAATCACGCAACTCAAATGGCTGCTCTTGACTATATTGTATCGGTTGAAAGTGATGTATTTGTACATTCTTACCCCGGAAATATGGCTCGAGCTGTTGAAGGCCATCGTCGTTTTCTTGGGAGAGGAAGAACCATATCTCCAGATAGGAAAGCTCTTGTTCGTTTGTTTGATAAACTGGCAATTGGATCAATGGTTGAGGGGAAAAAGCTGTCCAATATAGTGAATGATCTCCACAAAGGAAGGGTTGGCTTATTAAGGAAAAGAAAAGGGCCCATTCATGGAACAAAGGGTGTAGACAGGTTTCGGTCAGAAGAAACATTTTATGCAAATCCTTTACCTGATTGTCTATGTCGGACAGAATCACCACCTACTCATCATGTTAAGCAAAATCTTTTTCCTTCATAA 1692 0.3978 MSTPRVRGRKISINLLGEFSDSASLSSSSPKGLMQKRRNVPLIILLRRFLGATVFSIAITCFFFVHVHVSTTSPTDHNQFNEKIHTSRDLQSWTRELAPPHLSKTSPSTPKLNDSREDPDYEKLWKPPPNHGFLPCTKPTPNYTTPENTRGYLLVHTNGGLNQMRTGICDMVAIARMINATLVIPELDKKSFWHDNSNFSDIFDEKRFISSLANDIKIIKKLPKDLANETKMVKQFKSWSGMDYYQNEIATLWDYFEVIKASKSDSRLANNNLPPDIQKLRCRTCYEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHGLSTSEAEELRIIRENTNYWKRKHIDPNEERSKGFCPLTPKEVGIFLSALGYPRKTPIYIAAGEIYGGESHMTELLSRYPFLMSKEKLASVAELEPFSNHATQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKALVRLFDKLAIGSMVEGKKLSNIVNDLHKGRVGLLRKRKGPIHGTKGVDRFRSEETFYANPLPDCLCRTESPPTHHVKQNLFPS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3340 563 Pfam GDP-fucose protein O-fucosyltransferase 152 467 IPR019378 -
Tpr3g3340 563 PANTHER OS02G0726500 PROTEIN-RELATED 31 553 - -
Tpr3g3340 563 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 31 553 - -
Tpr3g3340 563 PIRSF UCP009360 17 550 IPR024709 -
Tpr3g3340 563 CDD O-FucT_plant 152 473 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3340 Tpr-Chr3 36807183 36811906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3340 96 549 Miscellaneous Gene Families AT1G22460 67.401 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3340 - - gmx:100807411 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3340 3 36807183 36811906 Tpr3g3340 3 36807183 36811906 ECH
Tpr4g2446 4 26183672 26189025 Tpr3g3340 3 36807183 36811906 PCT