Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1859 ATGGCCGATGATCTCCCTACCTTCACAAAGGATGTTTTACTTGTGAAGGGTTTGAAGAATTCCACGTTGGTTTGGAGGTTGGTTGTGTTAGCATTTGCAATGGTTTGTGGTGTGTATATATGTTCTATTTGTTTGAAGCAAATAAACACTGGTAACAAAATTGGTTTTCTAGATATTAAGGTTGTTCAAAAGCCTTGTCCTGAACCTAAGATTGAACCTTGGGAGATTCCTTATGTGCATTATCCGAATCCCAAAACTTACAGCAGGGAGGAATGCAGTTGCCACCCGGTGCGGTATTTTACTATTTTGTCGATGCAGAGATCGGGGAGTGGATGGTTCGAGACTTTTTTAAATAGTCATCCGAACATAAGCTCAAATGGTGAAATCTTTTCGGTTAAGGTTAGAAGGAGTAATATGACGACAATAACAGAGACTTTGGACACAATTTATAATCTAGATTGGGTTAGTAGTGCTTCCAAAAACGAGTGCACGGCTGCAGTTGGCTTGAAATGGATGCTTAATCAGGGACTGATGCAGAATCATGAAGATATTGCTGAGTATTTCAGGATACACGGTGTTTCAGTCATTTTTCTTTTCAGAAGGAATCTTTTGCGTCGGATGATTTCTGTACTTGCAAATGAATATGATAGGAATGCTAAGATATTAAATGGCACTCACAAATCTCATGTTCATTCACCCAAGGAGGCAGAAATACTCGCAAAATACAAGCCCACGCTCAATTCAACATTGTTGATTGCAAATTTGAAGCAAGTGAACGATACCACCACGAAAGCTTTAGAATATTTCAAGAGCACAAGGCACATAATGCTATACTATGAAGACGTTGTAAAAAATCGCACTAAATTAATGGACGTTCTGGAATTTTTAAAGGTTCCTCAAATGGATTTAAAGAGTCGTCAGGTAAAGATTCATAAAGGATCCTTATCGAGTCAAGTTGAAAATTGGAATGATGTGAGTAAAGCACTAACAGGCACGCAATATGAGAGTTTCATCCATGAAGATTACCGTAGGTAA 1035 0.3845 MADDLPTFTKDVLLVKGLKNSTLVWRLVVLAFAMVCGVYICSICLKQINTGNKIGFLDIKVVQKPCPEPKIEPWEIPYVHYPNPKTYSREECSCHPVRYFTILSMQRSGSGWFETFLNSHPNISSNGEIFSVKVRRSNMTTITETLDTIYNLDWVSSASKNECTAAVGLKWMLNQGLMQNHEDIAEYFRIHGVSVIFLFRRNLLRRMISVLANEYDRNAKILNGTHKSHVHSPKEAEILAKYKPTLNSTLLIANLKQVNDTTTKALEYFKSTRHIMLYYEDVVKNRTKLMDVLEFLKVPQMDLKSRQVKIHKGSLSSQVENWNDVSKALTGTQYESFIHEDYRR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1859 344 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 342 - -
Tpr4g1859 344 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 342 - -
Tpr4g1859 344 Gene3D - 96 327 IPR027417 -
Tpr4g1859 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g1859 Tpr-Chr4 19470802 19479037 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1859 - - gmx:100799665 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g1859 4 19470802 19479037 Tpr4g1859 4 19470802 19479037 ECH
Tpr1g3706 1 41150910 41153419 Tpr4g1859 4 19470802 19479037 ECH
Tpr3g3447 3 38016875 38021446 Tpr4g1859 4 19470802 19479037 ECH