Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3706 ATGATTGAAGAACCATTTGTCCTCAACAAGGACTATGATGTGGACATCAAATCTATTAAGAAGAAATCTTCATTGACATTGAAGTTGGCAGTTTTAATGTTAGCTACTGTTTATACAATATACATTTGCTCAATTAATTTAGAGCAACCTATGGTTGATCTCATTCGCACAAGCACCAAGTTGTTGGAACTAAGATCATTCACAAACCATTCATGTCATCCTTCTCTTGTCGAAGAATTCGATCTCCCCTACTTGCATTATCCACACCCAAAAACTTTCAACAGGGAGGAGTGTGGTTGCAATCCTGTGCGATATTTCTGCATCATATCAATGCAAAGATCTGGGAGTGGATGGTTTGAGACACTTTTGAATAGTCACATTAATATAAGTTCCAATGGAGAAATATTTTCTAAAGCCAAAAGAAGGGAAAATGTTTCATCAATTTTAAAGACAATGGATAAGGTGTACAATCTTGATTGGTTTACTAGTGCTTCCAAGAATCAATGCAATGCTGCTGTGGGATTCAAGTGGATGCTTAATCAGGGTTTGATGAAGCATCATAAGGAGATAGAGGAATATTTCCAAAGTAAAGGAGTTTTTGCAATATTCCTTTTAAGAAGGAATTTCTTACGTAGAGTAGTATCTGTGTTAGCAAATTCCTATGACAAATATGCCAAGCCACTCAATGGAACCCACAAATCTCATGTCCACTCCACAATAGAGGCTGAAGTTCTTGCTATTTACAAGCCACGGATCAATACCACATCACTAATGATAGAGCTAAAGCAAACAGAAGAGATAGCTGCAAAAGCAATTGAATACTTCAATAATACTCATCACATTGTTCTCTACTATGAAGATCTAAAAAATCCAACGAAACTGAAGGATGTTCAAGAATTTCTAAGATTGCCATATAGAGATTTGCAAAGCCATCAGTTTAAGATTCACACTGCACCATTGTCAAAGCAAATTGAAAATTGGGATGAAGTACAAGAAGCATTAAAAGGGACCCCTTATCAGAGTTTTCTCTACACAGACTAA 1041 0.3622 MIEEPFVLNKDYDVDIKSIKKKSSLTLKLAVLMLATVYTIYICSINLEQPMVDLIRTSTKLLELRSFTNHSCHPSLVEEFDLPYLHYPHPKTFNREECGCNPVRYFCIISMQRSGSGWFETLLNSHINISSNGEIFSKAKRRENVSSILKTMDKVYNLDWFTSASKNQCNAAVGFKWMLNQGLMKHHKEIEEYFQSKGVFAIFLLRRNFLRRVVSVLANSYDKYAKPLNGTHKSHVHSTIEAEVLAIYKPRINTTSLMIELKQTEEIAAKAIEYFNNTHHIVLYYEDLKNPTKLKDVQEFLRLPYRDLQSHQFKIHTAPLSKQIENWDEVQEALKGTPYQSFLYTD* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3706 346 PANTHER SULFOTRANSFERASE 9 346 - -
Tpr1g3706 346 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 9 346 - -
Tpr1g3706 346 Gene3D - 103 333 IPR027417 -
Tpr1g3706 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3706 Tpr-Chr1 41150910 41153419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3706 - - gmx:100819406 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3706 1 41150910 41153419 Tpr2g0866 2 10624360 10628669 ECH
Tpr1g3706 1 41150910 41153419 Tpr4g1859 4 19470802 19479037 ECH
Tpr1g3706 1 41150910 41153419 Tpr1g3706 1 41150910 41153419 ECH